| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0078 |
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| Symbol | |
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| ID | 4921640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 90789 |
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| End bp | 91649 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161589 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001092209 |
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| Protein GI | 127511012 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA TTCTGCTGGT AGCCAACCTC AATTGCGATC GTATTCTCAG ACTCGATAAA
CCCTTGAAGA TGGGGGGACG GTTTCATTAT CAAGATGGTG GCCAGCGCCT GGGGGGCGGT
GGTGCCAACA CAGGCATAGG CCTGGTGTGG GCAGGGCACG AGGTAGCCCT GGTGAGTCAG
GTGGGCCGCG ACGAGATAGG CGACTGGCTG CTGGCCGAGA CCAGCACACT AGGTATAGAT
TGCCGCCTGA TGCAGCGCTA TCAGCAACAT ACCTGTGAGA TGCTGCTGGT GATGACCCCG
GATGGCGAGC GCACCATCAT ACGTCCCGAG CGTCCTAGAT TCGAACTGGC GGCGCCGCCT
AATTGGCGCC AGTGGGATGC CCTCTATATC AACTCTTCCG CCGAAGGCGC TGTGAGCTGG
GCCAAGACTG CCTTGCCCCA CAGCCTGGTG GTGGCGCAGC TGGCCAAGGA TAACCGTGAG
CGTCCCTGCC ACGTGCTGAT TGCCTCGCGA GCCGACATGC AGGGTCGCAG CGAACTGTCG
CCCTGGCAGT ATGGCCTCTC CATCGCCGGA GACAGTCTGC AGGCCTTCAT AGTGACAGAT
GGCGAGTCGG GTGCCATTCT CTATCAGGCA GATTCGCAGA CTCATGTGGC GGCCGAGTCG
GCCAGTGTGG TGGATACCAC AGGGGCGGGA GATGCCTATG CGGCGGGCCT TATCCATGGA
CTGGTGCGTG GCGATGAGTT TTGTCAGGCC ATGGCCGAAG GTGCCCGTTG GGCCGCCTTT
GCGGTGGCCA CAGAGAGTTC GATACCGGGA GCGGAACTCA AAAACTATCT GGAAAATGAG
CGAGCAAAAG AAGAGGCCTA G
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| Protein sequence | MAKILLVANL NCDRILRLDK PLKMGGRFHY QDGGQRLGGG GANTGIGLVW AGHEVALVSQ
VGRDEIGDWL LAETSTLGID CRLMQRYQQH TCEMLLVMTP DGERTIIRPE RPRFELAAPP
NWRQWDALYI NSSAEGAVSW AKTALPHSLV VAQLAKDNRE RPCHVLIASR ADMQGRSELS
PWQYGLSIAG DSLQAFIVTD GESGAILYQA DSQTHVAAES ASVVDTTGAG DAYAAGLIHG
LVRGDEFCQA MAEGARWAAF AVATESSIPG AELKNYLENE RAKEEA
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