Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0055 |
Symbol | |
ID | 4922332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 66328 |
End bp | 66918 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640161567 |
Product | hypothetical protein |
Protein accession | YP_001092187 |
Protein GI | 127510990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA AGCCAAGCGG ACTCTTCGCA CGCTGGACTC AGCGTCGCCA ACAGGTGCAG GCCGAGGAAG AGGCGGCACG TCTGGCCGAA CAGGCCCAGG AAACGCCGGT CGAGCCATCG GTTGAGGCCG AAGGCGCGGA TGGTGTCGAA GCTAGCGACC AAGTCGCTCC CGAAGAGAAG AAGATACTGA CCGCCGAGGA TCTGCCGGAT CCGGAGAAGA TAGAGGTGGG CGGCAGCTTC GCCAGCTTCA TGGCCGACAA TGTCGATCCT GATGCCAAGA CGGCGGCCCT GAGGGCCCTG TGGAAGCAGC CACACTATCA CGAGATCGAT GGCCTGCTGG AATACGCCCT GGACTATACG GATCAGCCCA AGTTGACCGC CGAGGTATCG GCCGAGTTAG CCAAGAAGGT CTTCCGGCAT CTGACCAAGG ATGAAGAGAA GGTCGAGGCG GCTGCCGAGA CGTCGGAAAC CCAGCTGGCA CAGCAGGAAA ACGCTGCGGC GCAGGTCGAG GACAATTTGG ACAGGGCATC CGACGAGGTG TCCCAAAATG AACCAGAAAT ACAGGCCTCA ACCAAGCCTC CTGTTGTTTA A
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Protein sequence | MSDKPSGLFA RWTQRRQQVQ AEEEAARLAE QAQETPVEPS VEAEGADGVE ASDQVAPEEK KILTAEDLPD PEKIEVGGSF ASFMADNVDP DAKTAALRAL WKQPHYHEID GLLEYALDYT DQPKLTAEVS AELAKKVFRH LTKDEEKVEA AAETSETQLA QQENAAAQVE DNLDRASDEV SQNEPEIQAS TKPPVV
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