| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0017 |
|---|
| Symbol | |
|---|
| ID | 4921320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 19011 |
|---|
| End bp | 19499 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640161529 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001092149 |
|---|
| Protein GI | 127510952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0633142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.61095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTA TTCGGTTGAT AGACAAGCCT GAGGCCATAG GCCAAGTGGC TACCTGGTAT
CATGAGGAAT GGGGTCACCT GGGGCCGAAT CGCAGCCAGG CAGAGTTGAC CCACACCCTG
AGCCAATATC TGCAATTGGC GGGCATTCCC CAACTCTGGC TAGCCCTGCA TAACAATGTT
CCCGTCGGCG CTATCCAGCT CAGGTATCAG GAAAACCCTC AATATCCTGC CGATAGCGTC
TGGCTCGGCG GCATCTATGT AAGCCCCTCT TATCGAGGTC TCGGCATAGC TAAAGCGTTA
ATCGCCGTTG CCGAACAATA TGCCTTAGCC TTCGATGCAG ACGACCTCTA TCTGCAAACC
GAAGCCAAAA ACCTCGCCCT CTATCACAGC CTAGGCTGGC AGCTTGTCGC TACACTTCCC
TACTCAGACC TATTGGTCAG CGTGATGCGT AAATCCTTAG AAAGAGAGAA TCATGACACC
CGCAACTAA
|
|---|
| Protein sequence | MDIIRLIDKP EAIGQVATWY HEEWGHLGPN RSQAELTHTL SQYLQLAGIP QLWLALHNNV
PVGAIQLRYQ ENPQYPADSV WLGGIYVSPS YRGLGIAKAL IAVAEQYALA FDADDLYLQT
EAKNLALYHS LGWQLVATLP YSDLLVSVMR KSLERENHDT RN
|
|---|
| |