| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_16921 |
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| Symbol | rne |
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| ID | 4911858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 1425201 |
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| End bp | 1427009 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640161290 |
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| Product | ribonuclease E/G |
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| Protein accession | YP_001091916 |
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| Protein GI | 126697030 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.987709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC AAATTATCAT CGCTGAGCAG GCTCGAATTG CAGCACTACT CACAGATGAT
CGAGTTGATG AATTAATCGT CGCACAAGGT CATTATCAAA TTGGCGATAT TTTTTTAGGA
ACAGTTGAAA ATGTTCTCCC TGGAATCGAT GCCGCTTTCA TAAATATTGG TGAAAGTGAT
AAAAACGGAT TCATCCATGT TTCAGATTTA GGTCCACTAA GACTAAAAAA AGGGACATTT
GGAATAACTG AATTATTAGA ACCAAAACAA AAAGTTCTAG TACAAGTAAT AAAGGAACCC
ACAGGATCTA AAGGGCCTAG ACTAACTGGG AGTATTTCAA TACCAGGAAA ATACATGATA
TTACAGCCAT ATGGCCAAGG AGTAAATATT TCAAGAAAAA TAAATACAGA AACAGAACGA
AATCGCTTGA AAGCTCTTGG GGTTTTAATA AAACCTCCAA GCACAGGCTT GTTATTTAGA
ACAGAGGCTG AAAAGATAAA AGAAGAACTT CTAATTGAAG ATTTAGAACA AATAATTCAA
CAATGGGAAA ATATACTAAA AGTTTCTGAA GCTTCTCATC CGCCAAATTT AGTAAAAAGA
GATGAAGATT TCTCTCTAAA AATTTTGAGA GATCATATTA AAGAATCAAC TAAAAGCATA
ATTATCGACA GTAAATTTTC AGTTGCAAGG GCAAAAGACT ATTTAAAAAA TTATGAATCT
GATATAAATA TTGAATTTCA CGATAACAAT TCATCCCCAC ATGTTTTAGA TGAATACAAA
ATTAAGAAAA CAATTCAAAC AGCCCTCCAA CCTAGAGTAG ATCTTCCCTC GGGGGGTTAT
ATAATTATTG AACCTACTGA AGCTTTAACT GTAATCGATG TAAACTCTGG ATCATTTACA
AGATCGGCCA ACTCAAGACA AACCGTTTTG TGGACGAATT GCGAAGCAGC AGTTGAAATC
TCAAGACAAA TGAAGTTAAG AAATATTGGT GGAGTTATTG TAGTTGATTT TATTGATATG
GAATCTAGAA GAGATCAATT TCAGTTACTT GAGCATTTTA CTTCAGCAAT AAAAGATGAT
TCTGCTAGGC CTCAAATAGC TCAACTTACA GAATTAGGAT TGGTAGAGTT AACAAGAAAA
AGACAAGGTC AAAATATATA TGAATTGTTT GGTAAAAAAT GTTCTACATG CGATGGGACA
GGGCATGTAG AAAATATATT AAATCAAGAA ATTTCTAACT TAAAAATTAA AAATGATGAA
AATAAATTTA ATCAATCAGA CAATCTAAAA TCTCAAAATA TATATACATC ACAATCAACT
GATGAGCAGG AAAAAATAAT TAACAAGGAA TTACTTAACT CCAAAGACCT AAGTAAAGAG
AATTCTTCTT ATAAAAAAGA AAATGATAAT GATAATTTGA ACCAATCAAA TTCAAAGGAA
AAAAATACAA TAACAGTTGA TCTTACTAAT GAAGAAAAAA TTGTTTTCAG TCAATTAGGT
ATTAATCCTC TTATAAAATT AGGTAAAGAA TATCTAACTA GCAATAATTT TGTGCGTTTA
AAAGACAGTA ATAAGGAAAA GGAAAAAACC TTAGATAAAA AGACAAAATC AAAACAAATT
AAAAAAAGCT CAAAATCGGG AGAAGAAAAG ATTCAAATTA CTATTGAAGA TAAAGCAAAT
TCGAAAGACA ACTCAACAAA TAAAATTAAT GAAGTTATAT TTACAGAAGA AAAGGACGAA
ATTGAAGCTA CAGATGATCT AAAAAATGCA AGAAAAAAAA GAAGAAGATC TTCAGCAAGT
ATTGAATAA
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| Protein sequence | MSQQIIIAEQ ARIAALLTDD RVDELIVAQG HYQIGDIFLG TVENVLPGID AAFINIGESD
KNGFIHVSDL GPLRLKKGTF GITELLEPKQ KVLVQVIKEP TGSKGPRLTG SISIPGKYMI
LQPYGQGVNI SRKINTETER NRLKALGVLI KPPSTGLLFR TEAEKIKEEL LIEDLEQIIQ
QWENILKVSE ASHPPNLVKR DEDFSLKILR DHIKESTKSI IIDSKFSVAR AKDYLKNYES
DINIEFHDNN SSPHVLDEYK IKKTIQTALQ PRVDLPSGGY IIIEPTEALT VIDVNSGSFT
RSANSRQTVL WTNCEAAVEI SRQMKLRNIG GVIVVDFIDM ESRRDQFQLL EHFTSAIKDD
SARPQIAQLT ELGLVELTRK RQGQNIYELF GKKCSTCDGT GHVENILNQE ISNLKIKNDE
NKFNQSDNLK SQNIYTSQST DEQEKIINKE LLNSKDLSKE NSSYKKENDN DNLNQSNSKE
KNTITVDLTN EEKIVFSQLG INPLIKLGKE YLTSNNFVRL KDSNKEKEKT LDKKTKSKQI
KKSSKSGEEK IQITIEDKAN SKDNSTNKIN EVIFTEEKDE IEATDDLKNA RKKRRRSSAS
IE
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