Gene P9301_11541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_11541 
SymboldppB 
ID4912037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand- 
Start bp967393 
End bp968415 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content33% 
IMG OID640160740 
Productputative ABC transporter, oligopeptides 
Protein accessionYP_001091378 
Protein GI126696492 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.903436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAA ATTTAAATAA ACTACTAAAT TATTCCTTAT TAAAAATTTC ATTAATACCG 
ATAATGCTAT GGATAATTTC TTCATTAGTT TTTATTTTAT TAAGAGTTGC TCCCGGCGAT 
CCTGTGGATG CCATACTTGG ATCTGGTGCA GATGAGGTTT CTAGGGAATT TCTAAGAAAT 
AAATTGGGGC TAAATGAACC TTTAATAAAT CAATATTTTT CATATATTAA AAATATATTG 
CACTTAGATT TTGGCCAATC TCTTAGTACC CAAGAGCCAG TCCTTAAAAT TATTATAAAG 
TCATTGCCTG CAAGTCTTGA GCTTGGATTC TTTTCAATAT TAAGTGCCAT AGTAATAGGA 
TTTCCATTAG GATTAATTGG CTTAAGAAAT AGAGGAAAAA AGACTGATTA TATTGCGAGA 
ATATTAGGAA TTGCTACATA TGCGATCCCT CCTTTTTGGG GTGCAATGTT AGCTCAATTA 
TTATTTTCTG TATTTTTTAA TATTTCCCCA ATTGGAGGGA GATTTCCTAT ATTTCAGCAA 
CAACCTCAAA TTACAGGTTT TCTAGTTTTA GATAGTATTC TTTCAAATAA TATTATTGCC 
TTGAAAGATA GTCTTTATCA TCTCGCACTT CCTTCGATTA CCCTTGGCTT TTTATTGAGT 
GGTATATTCA GCCGCTCATT AAGAGTAAAT TTGGATAAGA CATTAAAAAG TGATTATGTA 
AATGCTGCTA TATGTAGAGG AATATCGAGG AAAAAAATAT TTTTAAACCA TGCATTGCCT 
AATGCTCTAT TGCCAATTGT CACTATTTCT GGCTTGACTC TGGCCTCTTT AGCAGGAGGT 
GCTCTGTTGT TCGAGGTGAC TTTCTCATGG CCAGGTATAG CTTTAAGATT ACATGAGGCT 
ATTTCTCAAA GAGACTATAC CTTGGTTCAA GGAATTGTAA TTTTTACCTC TATGCTTATA 
GTCTCTCTAA ATCTCTTAGT GGATATTTTA ATCGCATATT TAGATCCACG AATAGAGTAC 
TAA
 
Protein sequence
MSRNLNKLLN YSLLKISLIP IMLWIISSLV FILLRVAPGD PVDAILGSGA DEVSREFLRN 
KLGLNEPLIN QYFSYIKNIL HLDFGQSLST QEPVLKIIIK SLPASLELGF FSILSAIVIG 
FPLGLIGLRN RGKKTDYIAR ILGIATYAIP PFWGAMLAQL LFSVFFNISP IGGRFPIFQQ 
QPQITGFLVL DSILSNNIIA LKDSLYHLAL PSITLGFLLS GIFSRSLRVN LDKTLKSDYV 
NAAICRGISR KKIFLNHALP NALLPIVTIS GLTLASLAGG ALLFEVTFSW PGIALRLHEA 
ISQRDYTLVQ GIVIFTSMLI VSLNLLVDIL IAYLDPRIEY