| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_06611 |
|---|
| Symbol | |
|---|
| ID | 4910932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 587323 |
|---|
| End bp | 588324 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 640160242 |
|---|
| Product | putative light-dependent protochlorophyllide oxido-reductase |
|---|
| Protein accession | YP_001090885 |
|---|
| Protein GI | 126695999 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.588691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA ATAAAAATAT TTTAATTACT GGAGGTAATT CAGGAATAGG GCTTTTTGCC
ATTATTAATT TACTGAAGAC GAAAAATATT TTATATGTTG TAATAAAAAA CGAATTTAGA
AAGAATGAAT TTCTCAAAAA AATCGAGAAA TATTTTGATA AAAATTACCT TAGTAAATTT
TTAAATATTA TTGAAAATTG TGATCTTTCA GATCTAGATA ATATTAAAAA AATTAAAGAT
TACTTTATTA GTAAAAAGAT TTTTATAGAT ATTCTTGTTT TAAATGCAGG ATTGCAATAT
ACAGGCTCTT TTTACCCTAA AGTATCAAAA CAAGGCATAG AACTAACTTT TGCGGTAAAT
CATCTTGCAC ATTTTTACTT GGTAAATGTC CTAAAAGATT TTATTAGAGA TATAGAAGAA
TCTAGAATCA TTATTACATC ATCAGATGTA CACGACCCCA AAAGTTCAGG TGGCAATATA
GGAAAGAAAG CGGGACTTAA TAACCTAGTT AATTTAAGAA AAAAAGTAAC TGGGCAATTT
TTAAATTTTA ACGCTGATGA AGCTTATAAA AATAGTAAGT TATGTAATAT TTTGTTTGCT
AAAGAACTCG AAAAAAAATT AAAAATTTCC TCTAGTAAAA TTTCTGTAAT TACTTGGGCT
CCTGGTCTAG TAATACCAAA TGATGATCTC GGTTTTTTTA GATATAGTAA GCGCTTTAAT
CTCTTTGGGT ATTTAATTTT TTCTAAAGCT GCAAAAAATA TTTTAGGAAT TTCTGAAAGT
ATAGAAAATG CTGGTAAGAT ACTTTCTGAA ATTGTTCTTG ATTCAAATTT AAATAATATT
GGTTACGTTC ATTTAAGTAA TAAACTTATA TCTTTTAAGA AACATAAATT AGTTGAAAGT
AAGGTTAGTG ATGAGGCAAA TAATTCTGAG TTAGCTTCAA AACTCTGGAT TTTAAGTGAA
GAGATTTGTA GATCATTTGG CTTTGTTACT TTCAATATTT AA
|
|---|
| Protein sequence | MIKNKNILIT GGNSGIGLFA IINLLKTKNI LYVVIKNEFR KNEFLKKIEK YFDKNYLSKF
LNIIENCDLS DLDNIKKIKD YFISKKIFID ILVLNAGLQY TGSFYPKVSK QGIELTFAVN
HLAHFYLVNV LKDFIRDIEE SRIIITSSDV HDPKSSGGNI GKKAGLNNLV NLRKKVTGQF
LNFNADEAYK NSKLCNILFA KELEKKLKIS SSKISVITWA PGLVIPNDDL GFFRYSKRFN
LFGYLIFSKA AKNILGISES IENAGKILSE IVLDSNLNNI GYVHLSNKLI SFKKHKLVES
KVSDEANNSE LASKLWILSE EICRSFGFVT FNI
|
|---|
| |