Gene P9301_02201 details

Gene Information

• Locus tag: P9301_02201
• Symbol: rnhA
• ID: 4911906
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 205070
• End bp: 205789
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640159786
• Product: ribonuclease HI
• Protein accession: YP_001090444
• Protein GI: 126695558
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0328] Ribonuclease HI

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.137767
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTG ATTGTATTGC AATTGAAGCT GCAACAGATG GAGCCTGCAG TGGTAATCCA 
GGTCCAGGAG GTTGGGGTGG TTTAATAATT TTTGATGACA AAAGTGAATT AGAAATAGGT 
GGTTCCGAGC AAAATACTAC TAATAATAGA ATGGAACTAA CTGCGGCTAT AAAAACACTT 
GAGAAATTAA AAACCTTCAA ATTAAAAGAA AACTTTAAAT TAAGAACTGA TAGTAAATAT 
GTAATAGAAG GGTATACAAA ATGGATTATT AATTGGAAGA AGAATGGATG GAAAACAAGC 
TCAGGAAAAT CAGTTCAGAA TCTTGATTTA TGGCAAAAAA TTGATCAATT AAGAATTAAT 
GGTCTTGTAA TGGAATATGT TAAAGGCCAT AGCGGTGACA AACAAAATGA TAGGGTAGAT 
AAAATCGCGA CCAACTATAG CAAAGGTATA TCTCTAAAAA GTAACTTAAA AGAGTCTGAA 
TCTTCAGTAG AATTTTTTGA AAAAAATGCA CCTTCAGAAA TTCAGGAATT ATTTTCAAGA 
AATGAATTAA TTCAAAAATT TGCTGACAAA AAGTACTTGT TAAATTCACT AGAACTAAGT 
AATTTATTAG GTGAAGAAAA CCAGATAAAT ATAAAACAAT ATTTACTTTT TGAATGGCGT 
AATTGGAGAT TGATTCCCAA AGATAAAAAA TATTGGATAA TAGAAAAAAA AGAATTCTAA 

 

Protein sequence

MNIDCIAIEA ATDGACSGNP GPGGWGGLII FDDKSELEIG GSEQNTTNNR MELTAAIKTL 
EKLKTFKLKE NFKLRTDSKY VIEGYTKWII NWKKNGWKTS SGKSVQNLDL WQKIDQLRIN 
GLVMEYVKGH SGDKQNDRVD KIATNYSKGI SLKSNLKESE SSVEFFEKNA PSEIQELFSR 
NELIQKFADK KYLLNSLELS NLLGEENQIN IKQYLLFEWR NWRLIPKDKK YWIIEKKEF