Gene P9301_02001 details

Gene Information

• Locus tag: P9301_02001
• Symbol: prfB
• ID: 4912170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 184342
• End bp: 185406
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640159766
• Product: peptide chain release factor 2
• Protein accession: YP_001090424
• Protein GI: 126695538
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAGGA TTGTCTTTGA CGTTCCAAGA TTAAAAGCCA AAAGGAGAGA GTTAGAGCAA 
ATTTCTGCTC AGCCTGAATT TTGGGAGAAT CAAGAAGAAG CAAAAAAACA AATGTTAATC 
CTTGATGATG TTAAGGCACA ACTCGAATTG TTGGATAAAT GGAAAACTTT TATTTCTGAT 
GCTAATGCCT CTCTTGAACT TTATTCTTTA GAACCAGAAG AGGAAATGAT TTTGGAATCC 
AAGCAGGGCC TAAAGAAATT AAGAGAGAAT TTAGATAAAT GGGAATTTGA AAGATTGTTA 
TGTGGTGAAT ACGATAAGGA AGGAGCAGTA GTTTCTATTA ACGCAGGTGC TGGTGGAACA 
GATGCTCAGG ATTGGGTAGA GATCTTATTG AGAATGTATT CAAGATGGGC TGATAATAAT 
CAAATGAGTT TAATCATCAA TGAATTATCT CAAGGAGAAG AAGCAGGTAT CAAAAGTGTA 
ACTTTTGAAA TTGATGGAAA ATATGCATAT GGATATTTAC AACATGAAAA AGGCACTCAT 
AGATTAGTAA GAATTTCTCC TTTTAATGCC AATGGCAAAA GACAAACCAG CTTTGCTGGG 
GTAGAGGTTA TGCCAAAATT AGATGATAAT ATTTCACTTG ATATACCTGA AAAAGATTTA 
GAAATTACAA CGAGTAGATC TGGTGGAGCT GGAGGACAAA ATGTTAATAA AGTAGAAACA 
GCAGTGAGAA TTGTTCATTT GCCTTCAGGG ATTTCAGTAA GATGTACCCA AGAAAGATCT 
CAATTACAAA ATAAAGAAAA AGCTATGTTA CTCCTAAAGT CTAAACTATT AGTGATTGCT 
AAAGAACAAC GAGCTGCTGA AGTCGCTGAT ATTAAAGGTG ATATTGTTGA AGCTGCATGG 
GGCAATCAAA TAAGAAATTA TGTTTTCCAT CCCTATCAAA TGGTAAAAGA TCTTAGGACT 
ATGCAGGAGA CTAACGAGTT AGATAGTGTT TTAGATGGTG GACTTGAACC ATTTATTCAT 
GAATTATTGC GCATGAATAT TTCTTCTAAC GAATCTATTG AATAA 

 

Protein sequence

MLRIVFDVPR LKAKRRELEQ ISAQPEFWEN QEEAKKQMLI LDDVKAQLEL LDKWKTFISD 
ANASLELYSL EPEEEMILES KQGLKKLREN LDKWEFERLL CGEYDKEGAV VSINAGAGGT 
DAQDWVEILL RMYSRWADNN QMSLIINELS QGEEAGIKSV TFEIDGKYAY GYLQHEKGTH 
RLVRISPFNA NGKRQTSFAG VEVMPKLDDN ISLDIPEKDL EITTSRSGGA GGQNVNKVET 
AVRIVHLPSG ISVRCTQERS QLQNKEKAML LLKSKLLVIA KEQRAAEVAD IKGDIVEAAW 
GNQIRNYVFH PYQMVKDLRT MQETNELDSV LDGGLEPFIH ELLRMNISSN ESIE