Gene P9301_00131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_00131 
Symbol 
ID4912359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand- 
Start bp16721 
End bp17725 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content31% 
IMG OID640159577 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_001090237 
Protein GI126695351 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0438823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCA TTCAGCCTAA TTCTATTAAA AATATTCACA AATTAAGTAT TGCTCCAATG 
ATGGATTGTA CTGATAAGCA CTTCAGAATG ATAATGAGAA AAATAAGTTC TGAAGCTCTA 
TTGTATACGG AAATGATTGT GGCCCAGAGT TTAGTTTATA CGGATAAAAA AGAATATTTT 
TTAGACTTTA ATAGTGAAGA ACACCCGATA TCGATTCAGT TTGGTGGGGA CGACCCTAAA 
ATCCTCAAAG AAGCAGCCCA AATGGCACAG GATTGGGGTT ATGACGAAAT AAACTTTAAT 
GTTGGTTGTC CCAGTCCTAG GGTTTGTTCT GGAAATTTTG GCGCTTCTCT TATGAAAGAT 
CCTGAAAAAG TAGCAAAATG TATAGAATCT TTAAAAAATA ATTGCAACTT ACCGGTTACG 
ATCAAACACA GAATCGGTGT AGATAATGAT GATAGTTTCG TTAACTTGAA TAATTTCGTA 
AGAATTATCG CAAATGCTGG TGCGGACAGA TTTACAGTTC ATGCAAGAAA AGCAATATTA 
AAAGGTCTAA ATCCAAAACA AAACAGGACC ATACCTCCAC TAAATTATGA TGTAGTTAAA 
AAATTAAAAA AATCAAATCC AGAATTGTTA ATAGAAATCA ATGGGGGTTT AACAAATATC 
GATCAATCAT TAAAAGCCTT AAATGATTTT GATGGGGTAA TGATTGGACG GTCAATTTAT 
AAACATCCCT TAAGATGGTC TGAAATTGAT CAAAAAATTT ATGGAATTAA TAAAAAAAAC 
AAATCTGCTT CTAATATTAT ATTCTCCTTA ATTCCATACA TAGAAGCTCA TATAAGTAAT 
GGAGGAAAAT CTTGGGATAT TTGTAAACAT CTTATAAATT TAGTCGAAGG TATACCAAAA 
GCAAAAATTT GGAGAAATCA AATTTCAAAA AAATCTATAA AAAAGGAATT AGATATTGAA 
TATCTATTTA AATTAACGTC AGCCCTTCAA GAAATGGGTT TCTAA
 
Protein sequence
MNFIQPNSIK NIHKLSIAPM MDCTDKHFRM IMRKISSEAL LYTEMIVAQS LVYTDKKEYF 
LDFNSEEHPI SIQFGGDDPK ILKEAAQMAQ DWGYDEINFN VGCPSPRVCS GNFGASLMKD 
PEKVAKCIES LKNNCNLPVT IKHRIGVDND DSFVNLNNFV RIIANAGADR FTVHARKAIL 
KGLNPKQNRT IPPLNYDVVK KLKKSNPELL IEINGGLTNI DQSLKALNDF DGVMIGRSIY 
KHPLRWSEID QKIYGINKKN KSASNIIFSL IPYIEAHISN GGKSWDICKH LINLVEGIPK 
AKIWRNQISK KSIKKELDIE YLFKLTSALQ EMGF