| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_2907 |
|---|
| Symbol | |
|---|
| ID | 4891805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 2866232 |
|---|
| End bp | 2867203 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640151555 |
|---|
| Product | putative ABC transporter, periplasmic substrate-binding protein |
|---|
| Protein accession | YP_001082428 |
|---|
| Protein GI | 126448811 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAT TCAAGATCGT GGCCGCTCAT TCGATCGCGG CGGGCGTCGC GGCGTTCGCG
ATGCTGGGCG CCGGCGCCGC GCACGCGCAG ACCGTCAAGG TGCTGTCGAT CGTCGATCAT
CCGGCGCTCG ACGCGATCCG CGACGGCGTG CGCGCGCAGC TGAAGGCCGA AGGCTACGGC
GACGACAAGC TCAAGTGGGA ATACCAGAGC GCGCAGGGCA ACACCGGCAC CGCCGCGCAG
ATCGCGCGCA AGTTCATCGG CGACCGTCCG GACGTGATCG TCGCGATCGC GACGCCCGCC
GCGCAAGCCG TCGTCGCATC GACGAAGACC GTGCCTGTCG TCTATTCGGG CGTGACCGAT
CCCGTTGCCG CGCAGCTCGT CAAGGGCTGG GGGCCGACGG GTACCAACGT GACGGGCGTG
TCCGACCAGT TGCCGCTCGA CCGGCAGGTC GCGCTCATCA AGCGCGTGGT GCCGAAGGCG
AAGACGGTCG GGATGGTCTA CAACCCGGGC GAGGCAAACT CGGTCGTCGT CGTGAAGGCG
CTCAAGGAGA TCCTCGCGAA GCAGGGGATG ACGCTCAAGG AGGCGGCCGC GCCGCGCACC
GTCGACATCG CGCCCGCCGC GAAGAGCCTG ATCGGCAAGG TCGACGTGAT CTACACGAAC
ACCGACAACA ACGTCGTGTC CGCATACGAA TCGCTCGTGA AGGTCGCGAA CGAGGCGAAG
ATCCCGCTCG TCGCGGGCGA CACCGACAGC GTGAAGCGCG GCGGCATCGC GGCGCTCGGC
ATCAACTACG GCGACCTCGG CCGGCAGACG GGCAAGGTCG TCGCGCGGAT CCTGAAGGGC
GAGAAGCCGG GCGCGATCGC ATCGGAGACG AGCAGCAATC TCGAGCTGTT CGTGAACACC
GACGCGGCCG CCAAGCAGGG CGTGACGCTT GCGCCCGATC TCGTCAAGGA AGCGAAGACG
GTCATCAAGT AA
|
|---|
| Protein sequence | MKRFKIVAAH SIAAGVAAFA MLGAGAAHAQ TVKVLSIVDH PALDAIRDGV RAQLKAEGYG
DDKLKWEYQS AQGNTGTAAQ IARKFIGDRP DVIVAIATPA AQAVVASTKT VPVVYSGVTD
PVAAQLVKGW GPTGTNVTGV SDQLPLDRQV ALIKRVVPKA KTVGMVYNPG EANSVVVVKA
LKEILAKQGM TLKEAAAPRT VDIAPAAKSL IGKVDVIYTN TDNNVVSAYE SLVKVANEAK
IPLVAGDTDS VKRGGIAALG INYGDLGRQT GKVVARILKG EKPGAIASET SSNLELFVNT
DAAAKQGVTL APDLVKEAKT VIK
|
|---|
| |