Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_1927 |
Symbol | |
ID | 4893953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 1907971 |
End bp | 1908777 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640150582 |
Product | cyclic diguanylate phosphodiesterase |
Protein accession | YP_001081464 |
Protein GI | 126451159 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.475709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCCGC CCACCATTCC CGAGCTCGTC GCCCGCGCGG GCAAGCTCCC GTTCCTGTGC GACCACCTTG CGCTCGCAGA CGGCGCGCAA GGCGCCTACG CGCGCCTGCG CGATCTCAGG CTGGAGAGCG TCTACGAGCC GATCTACGAT GTGTCGATGC CGGGCGCGCC GCAATCGACG TCGCTGTCCG ACGCGATCGA GCGCTACGGC GACGAACTCG GCTTCCAGGC GGTCACGCAC GCGGGCGGCG CGCCGTTCGA TCCGATCGGC GCCGTCGCCG ACGATCAGGA GCTCGTCGCG CTCGACCGGC TCGCGCGCAG CCTGCACGCG ATCAACTTCT TCGGCGCGCA GCGGCACGGG CTGCTGTTCC TGCGCGTGCA CGAGCGGCTG CTGAAAAGCG TCAAGTACGA CCACGGCAAG CACTTCTCGA CCGTGCTCAA GGGGTTCGGG CTGCCGCCCG AGCGCATCGT GATCGAGCTG CCGGCGGCGG CCGTCGCGCA CAAGACGTTC CTCGGCTATC TGACGAAGAG TTATCAGCAC TACGGCTTCA AGGTCGCGGA CAAGCTGCCG GATCCGGGGC GCATCCTCGC CGTCGAATCC GACATGGCGC GGCCCGACTA CATCAAGATG GACGCCGCGA TCGCGCTGCG GGAAGGGATG GTGAAGGCGC TCGTCGGCTA TGCGCAGCGC GTGCGCATTC CGCTCATCTT CGATCACGTC GTCGACGAGA CGCAGTTCGA GCTGCTGCGC CAGTACGACG TGCGGCTCGT GCAGGGGCCG GTGTTTTCGC AACCGGCCGC GGTGTAA
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Protein sequence | MVPPTIPELV ARAGKLPFLC DHLALADGAQ GAYARLRDLR LESVYEPIYD VSMPGAPQST SLSDAIERYG DELGFQAVTH AGGAPFDPIG AVADDQELVA LDRLARSLHA INFFGAQRHG LLFLRVHERL LKSVKYDHGK HFSTVLKGFG LPPERIVIEL PAAAVAHKTF LGYLTKSYQH YGFKVADKLP DPGRILAVES DMARPDYIKM DAAIALREGM VKALVGYAQR VRIPLIFDHV VDETQFELLR QYDVRLVQGP VFSQPAAV
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