Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0294 |
Symbol | |
ID | 4893027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 281129 |
End bp | 282679 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640148962 |
Product | solute/sodium symporter (SSS) family protein |
Protein accession | YP_001079869 |
Protein GI | 126449903 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.459354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTGA CCGCGACCTT CGTCTTCGTG CTGTTCTTCG TCGGCGTGAC GATCATGGGT TTTCTCGCCG CGAACTGGCG GCGCGGCAAC CTCGCGCATC TCGACGAATG GGGGCTCGGC GGCCGGCGCT TCGGCACGGT CGTCACGTGG TTCCTGCTCG GCGGCGATCT CTACACCGCG TACACGTTCG TCGCCGTGCC GGCGCTCGTG TTCGGCGCGG GCGCGATGGG CTTCTTCGCG CTGCCGTACA CGATCCTCAT CTATCCGTTC GCGTTCGTCG TATTCCCGAA GCTCTGGAGC ATCGCGAAGC GTCACGGCTA CGTGACGGCC GCCGATTTCG TCAGCGCGCG CTACGGCAGC CGCTCGCTCG CGCTCGCCGT CGCGGTGACG GGCATCGTCG CGACGATGCC GTACATCGCG CTGCAGCTCG TCGGCATCGA GGTGGTGATC GGCGGGCTCG GCTTCGATAC CAAGGGCTTC ATCGGCGATC TGCCGCTCAT CATCGCGTTC GCGATCCTCG CCGCTTACAC GTACACGTCG GGGCTGCGCG CGCCCGCGAT GATCGCGATC GTCAAGGACA TCCTGATCTA CATCACGATC GCCGCGGCCG TGATCGTGAT TCCGGCGAAG CTGGGCGGCT TCGGGCACAT CTTCGGCGCG GTGCCGCCCG CGAAGCTGCT GTTGAAAGCG CCCGACGCGG CGAGCCTGAA CGGCTTCAGC GCGTACACGA CGCTCGCGAT CGGCTCGGCG CTCGCGCTGT TCCTGTATCC ACACTCGGTG ACGGCGATCC TGTCGTCGTC GTCGGGCAAC ACGATCCGCC GCAACATGGC GATGCTGCCC GCGTACTCGT TCGTGCTCGG CCTGCTGGCG CTGCTCGGCT ACATGGCGCT CGCATCGGGC GTGAAGGACA TGCCGGAATA CGCGCCGTAC TTCAAGGCGT TCGGCCCGAA TTTCGCGGTG CCGGCGTTGT TCCTGCATTT CTTCCCGTCG TGGTTCGTCG GCGTCGCGTT CGCCGCGATC GGGATCGGCG CGCTCGTGCC GGCGGCGATC ATGTCGATCG CGGCCGCGAA CCTGTACACG CGCAACATTC ATCGCGAGTT CGTCAACCGC AACATGACGC ACGATCAGGA AACGCACGTC GCGAAGCTCG TGTCGCTGAT CGTGAAGGTC GGCGCGGTCG CGTTCATTCT CGGGCTGCCG CTCACCTACG CGATCCAGCT GCAACTGCTC GGCGGGATCT GGATCATCCA GACGCTGCCC GCGATCGTGC TCGGCCTCTA TACGCGCGTG CTCGACTATC GCGGGCTGCT CGCCGGCTGG GCGGCGGGGC TCGTCTGCGG CACGTGGATG GCGATCTCGC TGAAGCTCGC GAGCTCGATC TTCACGATCC ATCTGTTCGG CCATGCGATT CCGGGCTACG CGGCCGTTTG GGCGCTGGCC GTGAATCTCG TCGTGTCGAT CGTGGTCAGC GTGCTGGTTC GCGCGTTCGG GATCGCGCAC GCGGAAGATC GCACGCGGCC GGAGGATTAT CTCGACGTCG TCGAGAGTTG A
|
Protein sequence | MNLTATFVFV LFFVGVTIMG FLAANWRRGN LAHLDEWGLG GRRFGTVVTW FLLGGDLYTA YTFVAVPALV FGAGAMGFFA LPYTILIYPF AFVVFPKLWS IAKRHGYVTA ADFVSARYGS RSLALAVAVT GIVATMPYIA LQLVGIEVVI GGLGFDTKGF IGDLPLIIAF AILAAYTYTS GLRAPAMIAI VKDILIYITI AAAVIVIPAK LGGFGHIFGA VPPAKLLLKA PDAASLNGFS AYTTLAIGSA LALFLYPHSV TAILSSSSGN TIRRNMAMLP AYSFVLGLLA LLGYMALASG VKDMPEYAPY FKAFGPNFAV PALFLHFFPS WFVGVAFAAI GIGALVPAAI MSIAAANLYT RNIHREFVNR NMTHDQETHV AKLVSLIVKV GAVAFILGLP LTYAIQLQLL GGIWIIQTLP AIVLGLYTRV LDYRGLLAGW AAGLVCGTWM AISLKLASSI FTIHLFGHAI PGYAAVWALA VNLVVSIVVS VLVRAFGIAH AEDRTRPEDY LDVVES
|
| |