| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A3143 |
|---|
| Symbol | |
|---|
| ID | 4903848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 3054493 |
|---|
| End bp | 3055920 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640146246 |
|---|
| Product | efflux ABC transporter, permease protein |
|---|
| Protein accession | YP_001077172 |
|---|
| Protein GI | 126456102 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.183035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACGT TCATGTTGGC GCTGCGCAAC CTGCAGCGGA ACCGGCGGCG CTCGATCACG
ACGCTGCTCG CGATGGTCGT CGGCGTGTGC GCGGTGCTGC TGTTCGGCGG CTTCAGCAAG
GACATCACGT TCGGATTGCA GACCGATTTC GTGCGGCGCA GCGGCCATTT GCAGATTCAG
CGTCACGGCT ATTACCAGTA CGGCAGCGGC AATCCGGTCG CCTACGGGAT CGGCGGCTAT
GCGCGGCTGA TCGCGCAACT GCGCGACGAT CCGGTGCTCG CGCCGATGAT CGCGGTGATC
ACCCCGACGC TGCAGTTCGG CGGGATCGCC GGCAACTTCG AGGCGGGCGT GTCGCGCACG
GTGCTCGCGC AGGGCGCGAT CGCCGACGAG CAGGACCGGA TGCAGCAATG GAACGACTAC
GGTTTTCCGT TGACGCCGAA GCCGTATCCG CTCGTCGGCA CCGCGCCGGA TGCGGCGATC
GTGGGCAACG GCGTCGCGCG TGTGCTGCAT CTGTGCGGGC CGCTGCGCGT GCCCGATTGC
GGCGACGGCG ACGTCGCGAG GCAGGCCGCG CCGCAAGCGG CGTCGGGCGC GTCGGGCGCG
GATGCGCCGG CCGACGTGCT CGCGCTCGCG GCGGCCGAGG CGCACGCGCA GGAAAGCGGG
CGCGGCGAGC GCGCGGGCGC GGCGCACATC GAGGTGCTCG CGGCGAACGC GTACGGCGCG
CCGAACGTCG GCGGCTTCAC GGTTGCGAAG GCCGAGCAGC AGGGCGTGAA GGAGCTCGAC
GACGTTTATC TCGCGATGCA CTTGCCGCGC GCGCAGCGGC TCGTCTACGG CGGCGACGCG
CCGCGCGTGA CGGCGATCGA GATCCAGCTC CGGCATACCG CGCAGCTTCC CGCCGCGCGT
GCGCGGCTCG ACCGGCTGTT CGGCGGCCGC TTCGAGGGCC AGCCGCTCGA CGTGCTCGAT
TTCGCCGCGC TGAACCCGTT CTACGACCAG ACGAACCGGA TGTTCTCGAT GATCTTCGGC
TTCGTGTTCG TGCTGATCGG CGCGATCGTG CTGTTCGTCG TCAGCAACAC GATGAGCACG
GCGATCCTCG AGCGAACCGT GGAGATCGGC ACGCTGCGCT CGATGGGCGT GCGCCGCGGC
GGCATCCAGG CGCTGTTCGT CTGCGAGGGC GCGCTGCTCG GCGTCGTCGG CGCGTCGATC
GGCGTGCTCG TCGCGCTCGC GCTCGCGTTC GTGGTCAATC ATAGCGGGCT CGCATGGACG
CCGCCCGCGC GGATCGACTC GGTCGCGCTG ACGGTGCGCG TGTGGGGCGA ATGGCGGCTC
ATCGCGCTGA CGTTCGTCGG GCTCGCGTTC GTCGCGGGAT TCTCGGCGTG GCTGCCCGCG
CGCCACGCGG CGCGGCTGTC GATCGTCGAC GCGCTGCGCT ATGCGTGA
|
|---|
| Protein sequence | MHTFMLALRN LQRNRRRSIT TLLAMVVGVC AVLLFGGFSK DITFGLQTDF VRRSGHLQIQ
RHGYYQYGSG NPVAYGIGGY ARLIAQLRDD PVLAPMIAVI TPTLQFGGIA GNFEAGVSRT
VLAQGAIADE QDRMQQWNDY GFPLTPKPYP LVGTAPDAAI VGNGVARVLH LCGPLRVPDC
GDGDVARQAA PQAASGASGA DAPADVLALA AAEAHAQESG RGERAGAAHI EVLAANAYGA
PNVGGFTVAK AEQQGVKELD DVYLAMHLPR AQRLVYGGDA PRVTAIEIQL RHTAQLPAAR
ARLDRLFGGR FEGQPLDVLD FAALNPFYDQ TNRMFSMIFG FVFVLIGAIV LFVVSNTMST
AILERTVEIG TLRSMGVRRG GIQALFVCEG ALLGVVGASI GVLVALALAF VVNHSGLAWT
PPARIDSVAL TVRVWGEWRL IALTFVGLAF VAGFSAWLPA RHAARLSIVD ALRYA
|
|---|
| |