Gene BURPS1106A_A2524 details

Gene Information

• Locus tag: BURPS1106A_A2524
• ID: 4903607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 2482888
• End bp: 2484897
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640145627
• Product: ABC transporter, permease/ATP-binding protein
• Protein accession: YP_001076554
• Protein GI: 126458183
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.265455
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCCAGA AAACTACCCA TCCGGGTGGA CGCGCGTTTA CCGACGTGCT CGCGTTCACC 
TTCCGGCACT GGCGCGCGCA ACCCGTGCGC ATCGCCGGGA TCGCCGCCCT TGCGCTCGCC 
ACCGCGCTCG GCGACGTACT CACGCCGCTG TTCGCCGGGC GCCTCGTCGA CGCGCTGTCG 
CACGGCGTGG CCGCCGCCGA CAAGGCCGCC GCGTGGAGCC GCGCGCTGCA CGCGTTCGGC 
GTGCTGATCG GCATCGGGCT CGCGTGCACG CTGCTGCGGC AGGCGGTGTT CCGCAACATC 
ATCGTGCTGA CGCTGAAGAT GATGAGCGAG ATCGCGGCGA ACGCGTTCCA CCGCGTGCAG 
CGCTTTTCGA CCGACTGGCA CGCGAACAGC TTCGCCGGCT CGACCGTGCG CAAGATCACG 
CGCGGCATGT GGGCGATCGA CCTGCTCAAC GACACACTGC TCGTCGCGCT GCTGCCGTCC 
ATCGTGATGC TGACGGGCGC GACGCTGCTG CTCGGCCTGC ACTGGCCGGT GATGGGCGCG 
GTGGTGGGCG GCGGCTCGGT CGTCTTCATC GCGGTGACGG TCGCGATGTC GCTGCGCTAC 
GTCGCGCCCG CGGCGCGCCT CGGCAACCTG TGGGACACGC GCATGGGCGG CGCGCTCGCC 
GACGCGGTGA GCTGCAACCC GGTCGTCAAG GCGTTCGGCG CGGAGACGCG CGAAGAGACG 
CGGCTCGACG GCGTCGTGTC GAAGTGGCGC GCGCGTACTC GCCGCGCGTG GCGGCGCGGC 
ACGCTGAACG GCGGCGTGCA GGGCGCGATG CTCGCCGCGA TGCAGGCGGC GATCCTCGGC 
GCCGCGCTAT GGCTGTGGGC GCACGATCGC GCGAGCATCG GCGACATCAC GTTCGCGCTG 
ACGACCTTCC TCGTGCTGCA AGGCTACCTG CGCGACATCG GGATGCACAT CCGCAACCTG 
CAGCGCTCGG TCAACGACAT GGAAGAGCTC GTGTCGCTCG AGCGGCAGCC GCTCGGCATC 
GACGACAAGC CGGGCGCGAA GCCGATCTCG ATCGCGCGCG GCGAGATCCG CTTCGAGCAC 
GTGACGTTCG GCTACAGCGG CGCGCACGCG AAGCCGCTGT ACGAGAACTT CTCGATCCGG 
ATCGCGCCGG GCGAGCGCGT CGGGCTCGTC GGGCATTCCG GTTCGGGCAA GACCTCGTTC 
ATCAAGCTGA TCCAGCGGCT GTACGACGTC GACGGCGGGC GCATCACGAT CGACGGGCAG 
GACATCGCGG AGGTCACGCA GGCGTCGCTG CGCAGCCAGA TCGCGATCGT CCAGCAGGAG 
CCATTGCTGT TCCACCGCAC GCTCGCCGAG AACATCGCGT ACGCGCGGCC CGGCGCGACG 
CGCGACGAGA TCGAGCGTGC CGCGCGGCTC GCGAGCGCGC ACGCGTTCAT CGACGCGTTG 
CCGCAGGGCT ACGACACGCT CGTCGGCGAA CGCGGGATCA AGCTGTCGGG CGGCGAGCGG 
CAGCGCGTCG CGATCGCGCG TGCGTTCCTC GCCGACGCGC CGGTGCTGAT CCTCGACGAA 
GCGACGTCGA GCCTCGACAG CGAGAGCGAA GTGCTGATCC AGCAGGCGAT GGAGCGGCTG 
ATGGTCGGGC GCACGACGCT CGTCGTCGCG CACCGGCTGT CGACGGTGCG CGCGCTCGAC 
CGGCTGATCG TGCTCGACAA GGGGCGCGTG ATCGAGGAAG GCAGCCACGA CGCGCTGATC 
CGGCTCGAAG GCGGCGTCTA CCGGCGGCTG TTCGAGCGGC AGGCGCTCGA GCTCGCGAAG 
GGGCTGATCG AGCAGACGGG CGGCACGGTC GCCGACTGGC TGCGCGATGA GCAGGACGAG 
CACGGCGGGC GCGACGAACG CAACGAGCGC GGCGAACGCG ACAAGCCGGG CGCGCTCGAC 
GGGCACGACG CGCGACGCAC GCACGGCGTG CTCGATGAGA GCCGCGACGG CGGGCAGGCG 
AACAATTCGG CGATGGCGAT GGAGAAGTAG 

 

Protein sequence

MVQKTTHPGG RAFTDVLAFT FRHWRAQPVR IAGIAALALA TALGDVLTPL FAGRLVDALS 
HGVAAADKAA AWSRALHAFG VLIGIGLACT LLRQAVFRNI IVLTLKMMSE IAANAFHRVQ 
RFSTDWHANS FAGSTVRKIT RGMWAIDLLN DTLLVALLPS IVMLTGATLL LGLHWPVMGA 
VVGGGSVVFI AVTVAMSLRY VAPAARLGNL WDTRMGGALA DAVSCNPVVK AFGAETREET 
RLDGVVSKWR ARTRRAWRRG TLNGGVQGAM LAAMQAAILG AALWLWAHDR ASIGDITFAL 
TTFLVLQGYL RDIGMHIRNL QRSVNDMEEL VSLERQPLGI DDKPGAKPIS IARGEIRFEH 
VTFGYSGAHA KPLYENFSIR IAPGERVGLV GHSGSGKTSF IKLIQRLYDV DGGRITIDGQ 
DIAEVTQASL RSQIAIVQQE PLLFHRTLAE NIAYARPGAT RDEIERAARL ASAHAFIDAL 
PQGYDTLVGE RGIKLSGGER QRVAIARAFL ADAPVLILDE ATSSLDSESE VLIQQAMERL 
MVGRTTLVVA HRLSTVRALD RLIVLDKGRV IEEGSHDALI RLEGGVYRRL FERQALELAK 
GLIEQTGGTV ADWLRDEQDE HGGRDERNER GERDKPGALD GHDARRTHGV LDESRDGGQA 
NNSAMAMEK