Gene BURPS1106A_A1569 details

Gene Information

• Locus tag: BURPS1106A_A1569
• Symbol: prlC
• ID: 4905564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 1528882
• End bp: 1530951
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640144675
• Product: oligopeptidase A
• Protein accession: YP_001075603
• Protein GI: 126457254
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0339] Zn-dependent oligopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGCAGA TAACATTAGC CAATCCCCTT CTGGATCGTT CTCAATTACC CCGCTTTGAA 
TCAATTCGCG ATTTCCATGT CCGCCCCGCC ATCGACGCGC TTCTGATTGA TCTCGATAAC 
GCGATATCGC GTGCCAGCGC AAAAAATTTG TCGCCGAATT GGGGCAATGT GATTGAGCCG 
GTGAGTCTCG CGCTCGAATC GCTCGACTAT GCGTGGGGCG CCGTCGCGCA TCTCGTATCG 
GTGCGCGATT GCGCGCCGTT GCGCGCCGCG TACGGAGCGT GCGCGGGACG GGTGTCGGCG 
GCGCTGTCGC GCTTTCGGCA AAACGGCGCG CTGCTCGATC GCTATCGCGC GGTTGCCGCG 
TCGGCGGGCT TTCGCGCCCT CTCGCCCGAG CGGCGCCAGG TCGTGCGCAA CCTGATACGC 
GACGCCCGGC TCGCCGGTGC CGAATTGCCG CCGGGCCCGA GAGCGCGGCT GAACGAGCTG 
CGCGAGCGCA TCGCGCAGCT CGCCGCCGTG TACCAGGACA ACATCGCGGA CGCCACCCGC 
GCGTTCGCGC GCATCGTGAC GACAGACGAG GAACTCGACG GCATTCCCGA CTACGCGCGC 
GCGGCGGCCG CCCGGCGCGC GGCCGCGGGC TTCGAATTCA CACTGGATTT CGCGTCCTAC 
CAGCCGGTCA TGCAGTTCTC GACGTGCCGC GCGTTGCGCG AGGAAATGTA TCGGGCGCGC 
TCGACTCGCG CGTCGGAATT CGACGCGGCG GGCGCGAACG ACGCCGCGCG GCGGGACAAC 
GCGCCCGTCA TGGCGGAAAT TCTGAAACTG CGGCGCGAGC AAGCCGCGCT GCTCGGCTAT 
CGCGATTTCG CCCAGATGTC GCTCGAGCAC AAGATGGCGC GCACCCCGGC GCGCGCGCGC 
GCGTTTCTCG AGCGCCTTCA TCGGCGAGTG AGCCCGAAGG CGAGCCTCGA GTGGCAGGCG 
CTGCAATCGT TCGCGCGCGC CGAGCTGGGC CTCGCCGACG TGCAGCCGTG GGACATCGCG 
TTCGTCGCCG AGCGCATGCG CGAGCGGTGC TTCGGGGTTT CGACGCAGGA CGTTCGCCGC 
TATTTCCCCG AACACGCGGT GCTGCGCGGG CTATTCGCGC TCGTCGAAAC GCTGTTCGAC 
ATCCGGATCC GCGCCGACGA AGGCAGCGTG TGGCATCAGG ACGTGCGCCG ATACCGGCTC 
GAGACCCTGC GCGGCGAACC CGTCGCGCAT CTCTACCTCG ATCTGTATGC GCGCGACGGA 
AAACGCGAAG GCGCGTGGGC GGCGAGCGGC CGCTCGCGCG GCACCGGCGC CGACGGCGCG 
ATACGCACCC CCGTCGCCTA TCTGATGTGC AACGTGGCCG CGCCCGCCGC CGGCATGCCC 
GCGTGCTTCG CGTTCGATCA GGTCTTGACG CTGTTCCATG AAATGGGCCA CTGTCTCCAT 
CATATGCTGA CCGGCGTGGC CGAAAGCGCG ATATCCGGCA CGAACGGCAT CGAATGGGAT 
GCAATCGAAT TTCCGTCGCA ATTCATGGAG CACTTCTGCT GGGATCCGGA GGTCGCTTCC 
ACGCTCAGCG CCCATGTCGA CACCGGCGAG CCATTATCGG ACGCGATGTT CGAGCGCATG 
CTCGCGGCGC GTCATTTCAA CCAGGGCATT GAAATGGCCC ATCAGATCGC GCTGTCGATG 
CTCGATATCG CTTTGCATTC CGGCGAATCA ATAGAATCAG TCAATTCAAT GCAAAACACG 
ATGCATGAAA TTTATCAAAA ATATGAATTT ACGCCGCTAG ACCGGCGGGC GCGAAGCGCG 
AACACATTTA GCCACATCTT CTCCGGCGGT TATGCGGCGG CCTATTACAG CTATCAATGG 
GCGCAGGTGC TCGCGGCCGA TGCGTATGCG GCCGTCGAGG AAGCCCGCGC CGAGCGCGCG 
GACGCGGGCA AGCGCGAAGC CGGCATGCGC TATCGGAAGG AAGTGCTCGA GCCGGGCGGC 
AGCCGGCCCG CGCTCGATTC GTTCGTCGCC TTCCGTGGCC GCGCGCCGAG CCTCGACGCG 
CTGCTGCGGC ACTGCCGGAT AGACCGCTAG 

 

Protein sequence

MTQITLANPL LDRSQLPRFE SIRDFHVRPA IDALLIDLDN AISRASAKNL SPNWGNVIEP 
VSLALESLDY AWGAVAHLVS VRDCAPLRAA YGACAGRVSA ALSRFRQNGA LLDRYRAVAA 
SAGFRALSPE RRQVVRNLIR DARLAGAELP PGPRARLNEL RERIAQLAAV YQDNIADATR 
AFARIVTTDE ELDGIPDYAR AAAARRAAAG FEFTLDFASY QPVMQFSTCR ALREEMYRAR 
STRASEFDAA GANDAARRDN APVMAEILKL RREQAALLGY RDFAQMSLEH KMARTPARAR 
AFLERLHRRV SPKASLEWQA LQSFARAELG LADVQPWDIA FVAERMRERC FGVSTQDVRR 
YFPEHAVLRG LFALVETLFD IRIRADEGSV WHQDVRRYRL ETLRGEPVAH LYLDLYARDG 
KREGAWAASG RSRGTGADGA IRTPVAYLMC NVAAPAAGMP ACFAFDQVLT LFHEMGHCLH 
HMLTGVAESA ISGTNGIEWD AIEFPSQFME HFCWDPEVAS TLSAHVDTGE PLSDAMFERM 
LAARHFNQGI EMAHQIALSM LDIALHSGES IESVNSMQNT MHEIYQKYEF TPLDRRARSA 
NTFSHIFSGG YAAAYYSYQW AQVLAADAYA AVEEARAERA DAGKREAGMR YRKEVLEPGG 
SRPALDSFVA FRGRAPSLDA LLRHCRIDR