| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1376 |
|---|
| Symbol | |
|---|
| ID | 4905853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 1295949 |
|---|
| End bp | 1297508 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640144482 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001075411 |
|---|
| Protein GI | 126456594 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.510979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGTG ATTTCTATTT CCCGTTGATC GCCACGCTCG CCTCCGCGCT CGCGCCGCCC
GGGCTGCGCG CGAAAATCCG CGAGGCGAGA GTCCTCTCCG CGTCCGCCGA CCTCGCGCGT
CTCACGCAGG ACGGTTGCGG CGACGCGGAG CGAGCGTACC GGATCCAGCT GCACGCCGAC
ATGCAGCTCG CGATGGCGCT CGAATTCGAT GCCGAGGAAT CGTATAGAAG GTCACGCAAG
CTGATGCATG CGCCGAAGGA CGAGATCCGT CTGCTGTCGT TTCGCAACAC CGGGTGGCAG
GCGCTGTTCC GGCGCCGGCT CGGCACCGCG ATGGCCTGCT TCGCGAACGT GACCAGCGAG
CCCGCCGTCG ATCCCTGCCG CCGCATCGAG GGGCTGTTCG GGACGATGTG CGTGTGGTTC
GAGCTCGGCC ATCTCGACGA GGCCGGCTAC CTGCTCGACG ACATCGAGCT CGCGATCGAG
CGCCTGCTCG CCTCGCACGA GGATTTCGCG CTGTGGCGCG AGCTCGCGCA GACGATGCGC
GCGGATCTGG ATCTGCAAAG ACTCGTGCGG CATGCACCGG AGCTCTCCGA TCACGTGTAC
TGGCAGTCGG CGCGCCTGAG CGATCCGGTC CGCCCGCCCG TTGAGCGCGA GCGGCTCGCG
AGCCGCCCGA TCGCCGAACA GGACGTGCGC TCGCCGCTGC TGCGCGCGCG CCTCGATTTC
AGGACCGCGC TGCGCCGCCT CGCCGGCGGG CAAGCCGACG CGCTCAACGA TCTGATGGCG
CATCTCGACT GGGCCGACGC GAACGGCCTG ACGTCCTATC AGAACTCGGC CCGGCAGGAA
ATCGCGCTCG CCGGCCTGAT CGGCAACGCG CCGCATATCG CGGAGATGGT GCTCGCGCCG
CTCGCGAACG AAATCCGCGT CGGGCACCAT CACGGTCATC TCGAGATCCT GTACTGCCTC
GCGAAGGTGA ATCAGGCGCA GGGCCGAACC CACCATTCGC AACAGCTGTA CAGCCGCTAC
GCGATGACGG CGGTCCATTG CGCGCGCAAG GGCGCGTGCG ATCTCGCGCG CAACAGCCCG
CAGGGGCACG CGCCCCACGT CGCGGACGAC ATCAGCGCGC GCCTGCCCGC CAAATACCGC
CGCGCGTACC ATTTCCTGCT GAGCAACCTC GAACGCAGCG ATCTGGCGAT CGGCGAGATC
GCGGAAGTCA TCGGCGTGAC GGTTCGCTCG CTGCAGAACA CGTTCAAGGC GAGCCTGGGC
GCGACGCCGT CGGAGATCAT CCGTCAGGAA CGGATGAAGC GCATCCATCG TGAACTGCAG
GGCGAGGATG CGCGGTTCGG CCAGCGCGTG CTCGACTCCG GCAACCGCTG GGGCGTGCCG
AATCGCTCGA CGCTGCTCAA CGCGTACAAG CGGCAGTTCA ACGAGGCGCC TTCGCAGACG
CTGCACCGCA AGCATCCGTA CAAGCCCGGC GAAGACGTCG CGTCCGGCGT CCTCGCGAGC
GCCGCGCATC CGGCGGCGGC CAGGCAGCAG CACGAAGCGA GCGTGTCGAC GGCCGACTGA
|
|---|
| Protein sequence | MFCDFYFPLI ATLASALAPP GLRAKIREAR VLSASADLAR LTQDGCGDAE RAYRIQLHAD
MQLAMALEFD AEESYRRSRK LMHAPKDEIR LLSFRNTGWQ ALFRRRLGTA MACFANVTSE
PAVDPCRRIE GLFGTMCVWF ELGHLDEAGY LLDDIELAIE RLLASHEDFA LWRELAQTMR
ADLDLQRLVR HAPELSDHVY WQSARLSDPV RPPVERERLA SRPIAEQDVR SPLLRARLDF
RTALRRLAGG QADALNDLMA HLDWADANGL TSYQNSARQE IALAGLIGNA PHIAEMVLAP
LANEIRVGHH HGHLEILYCL AKVNQAQGRT HHSQQLYSRY AMTAVHCARK GACDLARNSP
QGHAPHVADD ISARLPAKYR RAYHFLLSNL ERSDLAIGEI AEVIGVTVRS LQNTFKASLG
ATPSEIIRQE RMKRIHRELQ GEDARFGQRV LDSGNRWGVP NRSTLLNAYK RQFNEAPSQT
LHRKHPYKPG EDVASGVLAS AAHPAAARQQ HEASVSTAD
|
|---|
| |