| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0244 |
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| Symbol | clpB |
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| ID | 4904425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 231358 |
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| End bp | 234297 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640143351 |
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| Product | chaperone clpB |
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| Protein accession | YP_001074287 |
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| Protein GI | 126456099 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.707407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCT CGCGTCAGGC GCTGTTCGGG AAACTCGGGG CCACGCTCTT CAGGGCGATC
GAATCGGCCA CGGTTTTCTG CAAGCTGCGC GGCAATCCGT ACGTCGAGCT GGTGCACTGG
CTGCAGCAGT TGTTGCAGCA GTCCGACTCC GATCTGCACC GGATCGTGCG GCACGCCGGC
ATCGAGCGCG ACGCGCTCGA TCGCGACATC GCGCGCGCGC TCGCCACGCT GCCGGCCGGC
GCGGGCTCGA TCAGCGATTT TTCCCATCAC GTCGAAGCCG CGATCGAGCG CGCATGGGTG
CTCGCAACGC TGCGCTTCGG CGACCGGCGC ATCCGCGGCG CATGGCTCGT CGCCGCGCTC
GTCGATACGC CGGAACTGCG GCGCGTGCTG CTTTCCATTT CGCCGGCGTT CGCGAGGATT
CCTCACGACG ACGCTCTCGA CGACGTGCTG CCCGCGTGGA CGGCCGGTTC GCCGGAAGCG
GCGGACGCGC CGTACGACCA CGTCGATTCC GCGCCCGCTT CGCCGGGCGA GCCGTCCGGC
GCGACGCGCG CCGCGCCGAA CGGCTCGCCG CTCGAGCGAT ATTGCACGGA CCTGACCGCG
CGCGCGCGCG ACGGCGACAT CGACCCCGTC ATCGGGCGCG AGCTCGAAAT CCGCACGATG
ACCGACGTGC TGCTGCGGCG CAGGCAGAAC AATCCGCTGC TCACCGGCGA GGCGGGCGTG
GGCAAGACGG CCGTCGTCGA GGGCCTCGCG CTCGCGATCG CGAACGGCGA CGTGCCGCCG
AAGCTGGCCG ACGTGCGCCT GATGAGCGTC GACGTGGGCG CGCTGCTGGC CGGCGCGGGC
ATGAAAGGCG AATTCGAATC GCGCCTGAAA GGCGTGCTCG AGGCCGCGGC GAAATCCGTC
GCGCCCGTCA TCCTGTTCGT CGACGAGATT CACACGCTGA TCGGCGCGGG CGGACAGGCC
GGCACGGGCG ACGCGGCGAA CCTGCTCAAG CCCGCGCTCG CGCGCGGCAC GATCCGCACG
ATCGGCGCGA CGACATGGGC GGAGTACAAG CGGCACATCG AAAAGGATCC CGCATTGACC
CGCCGCTTTC AGGTGCTGCA AGTGCCGGAG CCCGAAGAGC CGGCCGCGGT GCACATGGTG
CGGGGCGTCG CGCGAGCGTT CGCGCGGCAC CACCGCGTGA CGGTGCGCGA CGAGGCGATC
CGCGCCGCCG TCGCGCTGTC GCACCGCTAC ATTCCGTCGC GGCATCTGCC GGACAAGGCG
ATCAGCCTCC TCGACACCGC ATGCGCGCGC GTCGCGCTCT CGCAGCACGC CGCGCCCGGC
GAACTGCAGC ACGTACGCCA GCGCTTGCTC GCGGCGCGCG CCGAGCGCGA TCTGCTCGAA
CAGGAGGCGC GCATCGGGCT CGACGCCGGG CAATCGCTCG CGGCGGTGCG CGAACGCATC
GAAGCGCTCG CGGCCGAGGA AGCGGCCGTC GACGCGCGCT GGAAGGCGCA GGCCGACGCG
GCGCGCGCGC TGCTCGCCGC GCGCGAGGCC GCACTCGCGG AATGTCACCG CGAGTCTTGC
TCCGAAACGC GCGCCGGCTC GCTCTCCGAA TCTCGTACCG AATCTCGTAC CGAATCGCGC
GCCAGATCAC ACATCGACTC CAGCGCCTAT GCTCACAGCG ACGTCCCGGC CGAAATGCAC
GTCGGCTCGC ACGCCGGCTC GCGCGCCGCA ACGTGTCCGG ACACGCACGC CGAAGCGCAC
GCCGCCCCCG CCTCGCCCCC GCCCGCCGCC GATACGCCGC ACGCCGGCGC CGCCCCCGGG
CTGCGCGAGC TCGAACGCGC GCTCGCGGCG GCCCAGGGCG ACGCACCGCT CGTGTTCCCG
GAAGTCGACG AGACGATCGT CGCGCAGATC GTCGCGGATT GGACCGGCAT TCCGGTCGGC
CGCATGATGA CCGACGAAGT CGCCGCCGTG CGCGCGCTGC CCGCGACGCT CGAGGCGCGC
GTGATCGGCC AGCCCGACGC GCTGCGGCAG ATCGGCGAGC GCGTGCAGAC CGCGCGCGCG
GGCCTCGCCG ATCCGAAGAA GCCGCTCGGC GTATTCCTGC TTGCGGGCCC GTCGGGCGTC
GGCAAGACCG AAACGGCGCT CGCGCTCGCC GAGGCGCTGT ACGGCGGCGA ACAGAGCCTG
ATCACGATCA ACATGAGCGA GTACCAGGAA GCCCACACCG TGTCGGGCCT CAAGGGCGCG
CCGCCCGGCT ATGTCGGCTA CGGCGAGGGC GGCGTGCTGA CCGAGGCGGT GCGGCGGCGG
CCGTACAGCG TCGTGCTGCT CGACGAGATC GAGAAGGCGC ACCGCGACGT GCACGAACTC
TTCTTCCAGG TCTTCGACAA GGGCTACATG GAAGACGGCG ACGGCCGCTA CATCGATTTC
CGCAACACGA CGATCCTGCT CACGAGCAAC GTCGGCGCGG AACTGAGCGC GAGCCTGTGT
GCCGACGCAT CGCTCGCGCC CGATGCCGCC GCGCTGCGCG ACGCGCTCAT GCCCGAACTG
CTGAAGGTCT TCCCCGCCGC GTTCCTCGGG CGCGTGAGCG TCGTGCCGTA CCGGCCGCTC
GAAGCGCGCG CGCTCGCGCG CATCGTGCGC CTGCATCTGG ATCGCGTCGT CGCGCGCATG
GCCGAGCGGC ACCGCATCGC GCTCGCGTAC GACGACGCCG TCGTCGACTA CGTCGTCGGG
CGTTGCCTCG TGCAGGAAAC CGGCGCGCGG CTGCTGATCG GATTCATCGA GCAGCACGTG
CTGCCTCGGC TGTCCGCGCT GTGGCTCGAC GCGTTCCCGT CGAAGGCGGC GCTCGCGCGC
ATCGACATCG GTGTGGCCGA CGCGGCCGCG CCCGCGGCGC GCGCGCTCGT CTTCCGGCCC
GGCCAAGCAA GCCGGGCGGG GCCGCCGAAC GCGCCGCTCA CCGCCGTGCA GGCCGGCTAG
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| Protein sequence | MAISRQALFG KLGATLFRAI ESATVFCKLR GNPYVELVHW LQQLLQQSDS DLHRIVRHAG
IERDALDRDI ARALATLPAG AGSISDFSHH VEAAIERAWV LATLRFGDRR IRGAWLVAAL
VDTPELRRVL LSISPAFARI PHDDALDDVL PAWTAGSPEA ADAPYDHVDS APASPGEPSG
ATRAAPNGSP LERYCTDLTA RARDGDIDPV IGRELEIRTM TDVLLRRRQN NPLLTGEAGV
GKTAVVEGLA LAIANGDVPP KLADVRLMSV DVGALLAGAG MKGEFESRLK GVLEAAAKSV
APVILFVDEI HTLIGAGGQA GTGDAANLLK PALARGTIRT IGATTWAEYK RHIEKDPALT
RRFQVLQVPE PEEPAAVHMV RGVARAFARH HRVTVRDEAI RAAVALSHRY IPSRHLPDKA
ISLLDTACAR VALSQHAAPG ELQHVRQRLL AARAERDLLE QEARIGLDAG QSLAAVRERI
EALAAEEAAV DARWKAQADA ARALLAAREA ALAECHRESC SETRAGSLSE SRTESRTESR
ARSHIDSSAY AHSDVPAEMH VGSHAGSRAA TCPDTHAEAH AAPASPPPAA DTPHAGAAPG
LRELERALAA AQGDAPLVFP EVDETIVAQI VADWTGIPVG RMMTDEVAAV RALPATLEAR
VIGQPDALRQ IGERVQTARA GLADPKKPLG VFLLAGPSGV GKTETALALA EALYGGEQSL
ITINMSEYQE AHTVSGLKGA PPGYVGYGEG GVLTEAVRRR PYSVVLLDEI EKAHRDVHEL
FFQVFDKGYM EDGDGRYIDF RNTTILLTSN VGAELSASLC ADASLAPDAA ALRDALMPEL
LKVFPAAFLG RVSVVPYRPL EARALARIVR LHLDRVVARM AERHRIALAY DDAVVDYVVG
RCLVQETGAR LLIGFIEQHV LPRLSALWLD AFPSKAALAR IDIGVADAAA PAARALVFRP
GQASRAGPPN APLTAVQAG
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