| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5602 |
|---|
| Symbol | |
|---|
| ID | 4881299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5855629 |
|---|
| End bp | 5856576 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640142920 |
|---|
| Product | polysulphide reductase, NrfD |
|---|
| Protein accession | YP_001073856 |
|---|
| Protein GI | 126438165 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0832881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.536935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAGC GCCTGGCCGT ACCGAAGGCC GAGTTCCGCT CCTATTACGG TCGGCAGATC
CTCAAGACGC CGGTGTGGAA CTGGATGATC GCCGCCTATC TGTTCTCCGG CGGACTGTCG
GCCGGCTCGG CGATGCTGGG CGCCGGCGCC GATCTGACGG GTAGGCCCGG GCTGCGGAAG
GTCTCCCGGA TCGGCTCGCT GGTCAGTCTC GTGGCGAGCA TGTACTTCCT GATCGGCGAC
CTCGGCCGGC CCGAACGGTT CCACCACATG CTGCGGGTGG CGAAACCGAG TTCGCCGATG
AGCATGGGCA CGTGGATCCT GAGCGCGTAC GGCCCCGGCG CCGGGGTGGC CGCGGTGGCC
GAGTTGATGC CCGCGCGGCT GCGGCGGACG CGGCTGGGAC GGTTGCTCGG ATGGGCGGCG
CGGCCCGCCG GTCTGGAGGC GGCGGCGGTG GCGCCCGGCG TCGCGTCGTA CACCGCGGTC
CTGTTGTCGC ACACCGCCGT TCCGGCCTGG AACGAGGCCC ACCCGTACCT GCCGTTCGTG
TTCACCGGTT CGGCGGCGGC CAGCGGCGGC GGGCTGGGCA TGCTGCTGGC GCCGCTCGAC
GAATCGGGCC CGGCCCGCCG GATGGCGGTC GCGGGTGCGG CACTCGAGGT GGCGGTATCG
CGGACGATGG AGCGCCGGCT CGGCGTCGTC GGCGAGGCCT ACACCACCGG TAGGGCGCAC
CGCCTGCGGC AGTGGTCGGA GGTGCTCACC CTCGGCGGCG TGGCCGGCGC GGTGATCGGC
CGTAACCGAG CCGTGCTGGC CCTCTCGGGG GCGGCGCTGC TCGCCGGGAG CGCGCTGCAG
CGCTTCGGGG TGTTCGAGGC CGGTGTGGAG TCGACGAGAG ACCCGAAATA CGTCGTGGTG
CCGCAACGGG AGCGGCTCGC CGCCGGTGAG CCTGCGCGCG CCCGCTGA
|
|---|
| Protein sequence | MKERLAVPKA EFRSYYGRQI LKTPVWNWMI AAYLFSGGLS AGSAMLGAGA DLTGRPGLRK
VSRIGSLVSL VASMYFLIGD LGRPERFHHM LRVAKPSSPM SMGTWILSAY GPGAGVAAVA
ELMPARLRRT RLGRLLGWAA RPAGLEAAAV APGVASYTAV LLSHTAVPAW NEAHPYLPFV
FTGSAAASGG GLGMLLAPLD ESGPARRMAV AGAALEVAVS RTMERRLGVV GEAYTTGRAH
RLRQWSEVLT LGGVAGAVIG RNRAVLALSG AALLAGSALQ RFGVFEAGVE STRDPKYVVV
PQRERLAAGE PARAR
|
|---|
| |