Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5302 |
Symbol | |
ID | 4880999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5554724 |
End bp | 5555509 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640142615 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001073556 |
Protein GI | 126437865 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.870324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTCT CGGGACGCGT CGCGCTGGTG ACCGGCGGTG CGTCCGGTAT CGGCCGCGCG ACCGCCGGTC GACTCGCGGC CGAGGGCATG CGGGTGTGCG TGCTCGATAT CGACGGGCCG GCGACGGAGG CGGTGGCCGA GTCGATCGGT GGGATCGGAT TACGTTGTGA CGTCACTGAT CCAGAGCAGG TCGACTCGGC GTTCGATACC TGCGTCGCGG AGTTGGGTGG CGTGGACGTG GCGTTCCTGA ACGCGGGCAT CACCATCGAC TGGTCGGGGG ACATCGGCGC CCTCGACCTG GCTCAGTACC GGAAGTCCGT CGGCGTCAAC GTCGACGGTG TGGTGTTCGG GGTGCGGGCG GCGGTGCGGA CCATGCGGAC ACTCGACCCC GGCGTCGACC GCGCAATTCT GGCGACCGCG TCTCTGGCAG GGTTGATGCC CTGGCATCCC GACCCGGTCT ACTCGCTGGG CAAGCACGGC GTGGTCGGGT TCATGCGCTC GATCGCCCCG AACCTCGCCG CCGAAGGCAT TGCAGTGCAC ACCATCTGCC CGGGTATCAC CGAGACCGGG GTGCTCGGCG ATCGGCGGTC GCTGGTGGAA CGCATCGGCG TGCCTGTGAT GGAGCCGGAG ATGATCGCCG ACGCGGTGCT GCTGGCACTC GGCGCCCCGA TGTCCGCGGC CGGGACGTGC TGGGTGGCTC AGCACGGAAA GCCGGCCTGG CCGATGGCAT TCGCGCCGGT GGACAGTCCC GACAGCCGGC TCAACGTGCC GGTGAGGGCC CGCTGA
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Protein sequence | MKLSGRVALV TGGASGIGRA TAGRLAAEGM RVCVLDIDGP ATEAVAESIG GIGLRCDVTD PEQVDSAFDT CVAELGGVDV AFLNAGITID WSGDIGALDL AQYRKSVGVN VDGVVFGVRA AVRTMRTLDP GVDRAILATA SLAGLMPWHP DPVYSLGKHG VVGFMRSIAP NLAAEGIAVH TICPGITETG VLGDRRSLVE RIGVPVMEPE MIADAVLLAL GAPMSAAGTC WVAQHGKPAW PMAFAPVDSP DSRLNVPVRA R
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