Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5273 |
Symbol | |
ID | 4880970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5522639 |
End bp | 5523394 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640142584 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_001073527 |
Protein GI | 126437836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.467188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGCCA GCCTGCGTGT CGGAGCCGCG ATCGCCACCA GCCTGCTCGT CGCCGCCTCC ACATTCGCCA CGACGACGTT CGCCGCTCCT GCTTCCGCCG CGCCCGCCAA CATCGCCGGG AAGATCGTGT TCCTCGACCC CGGCCACAAC GGCGCCAACG ACGCCTCGAT CAGCAGGCAG GTGCCCACCG GCCGCGGCGG CACGAAGGAC TGTCAGGCCA GCGGCACGTC GACCGAGGAC GGTTATCCGG AGCACACGTT CGCCTGGGAC ACCACGCTGC GCATCCGGCA GGCGCTGACC GCGCTCGGCG TGCGCACCGC GATGTCGCGG GGCAACGACA ACGCGCTCGG CCCGTGCGTC GACGAGCGCG CCGCCCTGGC CAACTCCGTC CGGCCCAACG CGATCGTGTC CGTCCACGCC GACGGCGGTC CGCCGACCGG ACGCGGCTTC CACGTGCTGT ATTCGTCGCC CCCGCTCAAC GAGGCGCAGG CCGGTCCGGC CGTACAGTTC GCGCAGGTCA TGCGCGATCA GCTGTCCGGA TCCGGATTCG TCCCGTCGAC ATACATCGGT TCGGGTGGGC TGAACCCGCG CAGCGACATC GCCGGGCTCA ACCTCGCGCA GTACCCGTCG ATCCTGGTGG AGCTGGGCAA TATGAAGAAC CCGGCCGATT CGGCGGTGAT GAAGACCGCC GAGGGCAGAC AGCGCTACGC CGACGCGGTC GTCCGCGGTA TCGCCGCGTT CCTGGCGCTG TCCTGA
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Protein sequence | MPASLRVGAA IATSLLVAAS TFATTTFAAP ASAAPANIAG KIVFLDPGHN GANDASISRQ VPTGRGGTKD CQASGTSTED GYPEHTFAWD TTLRIRQALT ALGVRTAMSR GNDNALGPCV DERAALANSV RPNAIVSVHA DGGPPTGRGF HVLYSSPPLN EAQAGPAVQF AQVMRDQLSG SGFVPSTYIG SGGLNPRSDI AGLNLAQYPS ILVELGNMKN PADSAVMKTA EGRQRYADAV VRGIAAFLAL S
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