Gene Mjls_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5273 
Symbol 
ID4880970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5522639 
End bp5523394 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID640142584 
Productcell wall hydrolase/autolysin 
Protein accessionYP_001073527 
Protein GI126437836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.467188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCCA GCCTGCGTGT CGGAGCCGCG ATCGCCACCA GCCTGCTCGT CGCCGCCTCC 
ACATTCGCCA CGACGACGTT CGCCGCTCCT GCTTCCGCCG CGCCCGCCAA CATCGCCGGG
AAGATCGTGT TCCTCGACCC CGGCCACAAC GGCGCCAACG ACGCCTCGAT CAGCAGGCAG
GTGCCCACCG GCCGCGGCGG CACGAAGGAC TGTCAGGCCA GCGGCACGTC GACCGAGGAC
GGTTATCCGG AGCACACGTT CGCCTGGGAC ACCACGCTGC GCATCCGGCA GGCGCTGACC
GCGCTCGGCG TGCGCACCGC GATGTCGCGG GGCAACGACA ACGCGCTCGG CCCGTGCGTC
GACGAGCGCG CCGCCCTGGC CAACTCCGTC CGGCCCAACG CGATCGTGTC CGTCCACGCC
GACGGCGGTC CGCCGACCGG ACGCGGCTTC CACGTGCTGT ATTCGTCGCC CCCGCTCAAC
GAGGCGCAGG CCGGTCCGGC CGTACAGTTC GCGCAGGTCA TGCGCGATCA GCTGTCCGGA
TCCGGATTCG TCCCGTCGAC ATACATCGGT TCGGGTGGGC TGAACCCGCG CAGCGACATC
GCCGGGCTCA ACCTCGCGCA GTACCCGTCG ATCCTGGTGG AGCTGGGCAA TATGAAGAAC
CCGGCCGATT CGGCGGTGAT GAAGACCGCC GAGGGCAGAC AGCGCTACGC CGACGCGGTC
GTCCGCGGTA TCGCCGCGTT CCTGGCGCTG TCCTGA
 
Protein sequence
MPASLRVGAA IATSLLVAAS TFATTTFAAP ASAAPANIAG KIVFLDPGHN GANDASISRQ 
VPTGRGGTKD CQASGTSTED GYPEHTFAWD TTLRIRQALT ALGVRTAMSR GNDNALGPCV
DERAALANSV RPNAIVSVHA DGGPPTGRGF HVLYSSPPLN EAQAGPAVQF AQVMRDQLSG
SGFVPSTYIG SGGLNPRSDI AGLNLAQYPS ILVELGNMKN PADSAVMKTA EGRQRYADAV
VRGIAAFLAL S