Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5008 |
Symbol | |
ID | 4880706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 5246967 |
End bp | 5248088 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640142318 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_001073263 |
Protein GI | 126437572 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.498712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTACCG AACTGTGTGA CCGCTTCGGC ATCGAGTATC CGATCTTCGT CTTCACGCCC TCGGAGAAGG TCGCGGCCGC CGTCACCCGC GCCGGCGGGA TGGGTGTGCT CGGGTGTGTG CGGTTCAACG ACTCCGACGA CCTCGAGAAC GTCCTTCAGT GGATGGACGA GAACACTCTC GGCAAGCCCT ACGGGGTCGA CGTCGTGATG CCCGCGAAGA TCCCGACCGA GGGCACCGCG GTCGACATCA ACAAGCTGAT CCCGAAGACG CATCGGGAGT TCGTCGACAA GACGCTCGCC GATCTCGGGG TGCCGCCGCT GCCCGAGGAC GAGGCCCGCA ACGAAGGTGT GCTGGGCTGG CTGCACTCGG TGGCCAGGTC GCATGTGGAG GTCGGCCTCA AGCATCCGAT CAAGTTGATC GCCAACGCGT TGGGTTCGCC GCCGAAGGAC GTCATCGACC AGGTGCACGA GGCGGGTGTG CCGGTCGCGG CACTGGCGGG CAGCGCCAAA CATGCGCAGC GGCATGTCGA CAACGGCGTC GACATCGTCG TTGCCCAGGG CCATGAGGCC GGTGGGCACA CAGGTGAGAT CGGTTCGATG GTGCTGTGGC CGGAGATCGT CGACGCACTC GACGGTCGAG CGCCGGTGCT CGCCGCCGGC GGTATCGGAA CGGGGCGTCA GGTCGCGGCC GCGCTCGCGC TCGGCGCGTC CGGGGTGTGG ATGGGGTCGG CGTTCCTGAC GGCGGCGGAA TACGATCTCG GACACCGCAA ACCGAGCGGC GTGTCGACCA TCCAGGAGGC GATGCTGCGC GCCACCTCCA GCGACACCGT TCGCCGGCGG ATCTACACCG GTAAGCCGGC CCGGCTGCTG AAGACGAAGT GGACCGAGGC CTGGGACGCC CCCGACGCTC CCGAACCGCT GCCGATGCCG CTGCAGAACA TCCTCGTCAG CGAGGCGCAT CAGCGGATGA ACGAGTCGGA CAACCCGGAC ACGGTGTCGA TGCCGGTCGG TCAGATCGTC GGCCGGATGA ACGAGATCCG CCCGGTCGCC GACATCATCG CCGAACTGGT GTCGGGCTTC GAAGAGGCCT CGAAGAGGTT GGACGGCATC CGCGAAGGCT GA
|
Protein sequence | MRTELCDRFG IEYPIFVFTP SEKVAAAVTR AGGMGVLGCV RFNDSDDLEN VLQWMDENTL GKPYGVDVVM PAKIPTEGTA VDINKLIPKT HREFVDKTLA DLGVPPLPED EARNEGVLGW LHSVARSHVE VGLKHPIKLI ANALGSPPKD VIDQVHEAGV PVAALAGSAK HAQRHVDNGV DIVVAQGHEA GGHTGEIGSM VLWPEIVDAL DGRAPVLAAG GIGTGRQVAA ALALGASGVW MGSAFLTAAE YDLGHRKPSG VSTIQEAMLR ATSSDTVRRR IYTGKPARLL KTKWTEAWDA PDAPEPLPMP LQNILVSEAH QRMNESDNPD TVSMPVGQIV GRMNEIRPVA DIIAELVSGF EEASKRLDGI REG
|
| |