| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4599 |
|---|
| Symbol | |
|---|
| ID | 4880298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4826724 |
|---|
| End bp | 4827929 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640141902 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001072855 |
|---|
| Protein GI | 126437164 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0252819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGA ATCGCACGCA GGCGCCCGCC CGATCGCACC GATTGCGCTG GGTCCTGCTG
GCGTTGTGCG TCACCGAGAT CACCAGTTGG GGGGTGCTGT ACTACGCCTT CACCGTGCTC
TCCGACCAGA TCACCGACGA GACGGGATGG TCGGCCCCCG CGGTGACCGC AGCGTTCTCG
GCGGGACTGG TGACCTCGGC GTTCGTCGGT ATCCCGGTCG GCAGGTGGCT GGACCGGGTT
GGTCCACGCT GGATCATGAC GGCCGGTTCG GCCCTGGGTT GCGTTTCCGT GGTCGCAGTG
GTGGCCGCAT CGTCGTACGC CTGGTTCGTC GCGGCGTGGG TGCTCGCCGG TGTGGCGATG
AGCGCGGTCT TCTATGCACC GGCGTTCGCC GCCCTCACCC GGTTCTTCGG CGCCGACGCC
GTGCGGGCAC TGACGGTCCT GACGTTGGTG GCCGGCTTCG CCAGCACCGT GTTCGCACCG
CTGACCGCCG CGTTGTCGGC GCAGTTGAGT TGGCGCAGCG CCTATCTGGT GTTGGCCGTG
GTGATGGCGG TCATCACGAT CCCCGCGCAC TTCTTCGGCC TGCGGCGACC CTGGCCGGCC
GTGGTGACCG CTCACGCGGT GGAGTCCCCG ACGCGCACGG CGCGCAGTGG TGCGTTCATC
GCGTTGGTGG CGGTGTTCGC CCTCGGTGGG GTGGCGTCGT ATGCGGTGAT CGTCAACCTG
GTGCCCCTGA TGGCCGAGCG CGGCATCAGC ACCGGCGCCG CGGCGGTCGC GCTGGGGCTC
GGCGGCGCCG GGCAGGTTCT GGGCCGCCTG GGTTATCAGA CACTGGTGCG CCGCGTCGGT
GTCGTGACGC GGACGGTGGT GATCATGGCC GGTATCGCGG CCACGACCGC GCTCCTGGGG
GTCTTCACCG GCTACGCCGC CCTGCTGGCG GTCGCGATCG GCGCGGGCGT GATGCGCGGA
ATCATGACGC TGCTTCAGGC GACAGCGGTC ACCGAGCGTT GGGGCGCAAC CCATTACGGC
CATCTCAGCG GGATCCTCAA CGCACCGGTG ATGATCGCCA CCGCCATCGG GCCCTTCGTC
GGTGCGGCCC TGGCGAGCAT CCTCGGCGGT TACGCGGCGA TGTTCCTCGC GCTCGGTGCG
GTCGCAGCCG TCGCCGCGGT CACGGCTTTG GCGACCTCGA CTCATTCCCG GCGCCGGCGA
GACTGA
|
|---|
| Protein sequence | MSSNRTQAPA RSHRLRWVLL ALCVTEITSW GVLYYAFTVL SDQITDETGW SAPAVTAAFS
AGLVTSAFVG IPVGRWLDRV GPRWIMTAGS ALGCVSVVAV VAASSYAWFV AAWVLAGVAM
SAVFYAPAFA ALTRFFGADA VRALTVLTLV AGFASTVFAP LTAALSAQLS WRSAYLVLAV
VMAVITIPAH FFGLRRPWPA VVTAHAVESP TRTARSGAFI ALVAVFALGG VASYAVIVNL
VPLMAERGIS TGAAAVALGL GGAGQVLGRL GYQTLVRRVG VVTRTVVIMA GIAATTALLG
VFTGYAALLA VAIGAGVMRG IMTLLQATAV TERWGATHYG HLSGILNAPV MIATAIGPFV
GAALASILGG YAAMFLALGA VAAVAAVTAL ATSTHSRRRR D
|
|---|
| |