| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4242 |
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| Symbol | |
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| ID | 4879947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 4480513 |
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| End bp | 4481613 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640141550 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001072504 |
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| Protein GI | 126436813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.156168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCAT CATCGGCTCT TCGCGCAAGC GGCTCATCGC TGGATCTCCG TGGTGACCCG
GTCGAGCTGA CGGCCGCACT CGTCGACATC CCCAGCGAGT CGCGCCACGA GCAGCGCATC
GCCGACGAGA TCGAGGCCGC ACTGCGCGAA CAGACAGACG GTTTCGAGAT CATCCGCAAC
GGCGACGCGG TGCTGGCCCG CACCAACCGG GGGCTCCCGT CACGCGTGCT GCTGGCCGGG
CACATCGACA CCGTGCCCGC CGCCGACAAC GTCCCCAGCC GCCGGGTCGG TGACGAGCTG
CACGGCTGCG GCACCTCCGA CATGAAGTCC GGGGACGCGG TGTTCCTGCA CCTCGCCGCC
ACTGTCGCCG ACCCCGCACA CGACCTCACG CTGGTGATGT ACGACTGCGA AGAGATCGAG
GCGTCGGCCA ACGGGCTCGG CCGCATCGAA CGCGAACTGC CCGAGTGGCT GCAGGCCGAC
GTCGCGATCC TCGGCGAACC GTCCGGCGGT TTCATCGAGG CCGGCTGCCA GGGCACGCTG
CGAGTCGTGG TGAGCGCCAC CGGAACCCGG GCGCACTCCG CGCGATCCTG GTTGGGCGAC
AACGCCATTC ACAAACTCGG CGCGGTCCTC GACCGGTTGG CCGCCTACCA GGCCCGCAGC
ATCGACATCG ACGGCTGCGT CTACCGCGAG GGACTCTCCG CGGTGCGCAT CGACGGCGGC
ATCGCGGGCA ACGTGATCCC CGACGCCGCC TCGGTCACCG TCAACTTTCG CTTCGCCCCC
GACCGCACCG TCGACCAGGC GCTGGCCCAC GTCCACGAGG TCCTCGACGG ACTCGACGTC
ACCGTCGAGC AGACCGACGC CGCCGCCGGA GCCCTGCCGG GGCTGACCAG GCCGGCGGCC
GCGGCGCTGG TCGAGGCCGC CGGCGGACAG GCGCGGGCCA AGTACGGGTG GACCGACGTG
GCGCGGTTCG CGGCGCTGGG GATCCCGGCC GTCAATTACG GTCCGGGGGA TCCGAACCTC
GCCCACCGCG CGGACGAACG GGTCGACGTC GGCCAGATCA CCGCGACCAC CGAGGTGCTG
CGCCGGTATT TAACCGCTTG A
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| Protein sequence | MAPSSALRAS GSSLDLRGDP VELTAALVDI PSESRHEQRI ADEIEAALRE QTDGFEIIRN
GDAVLARTNR GLPSRVLLAG HIDTVPAADN VPSRRVGDEL HGCGTSDMKS GDAVFLHLAA
TVADPAHDLT LVMYDCEEIE ASANGLGRIE RELPEWLQAD VAILGEPSGG FIEAGCQGTL
RVVVSATGTR AHSARSWLGD NAIHKLGAVL DRLAAYQARS IDIDGCVYRE GLSAVRIDGG
IAGNVIPDAA SVTVNFRFAP DRTVDQALAH VHEVLDGLDV TVEQTDAAAG ALPGLTRPAA
AALVEAAGGQ ARAKYGWTDV ARFAALGIPA VNYGPGDPNL AHRADERVDV GQITATTEVL
RRYLTA
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