| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3960 |
|---|
| Symbol | |
|---|
| ID | 4879669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 4186826 |
|---|
| End bp | 4188397 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640141272 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001072226 |
|---|
| Protein GI | 126436535 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.454538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0173498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACC TTCGACCCCT CTGGGACACC GAGGCGTTCA GCGGTGTCTA CGCCGGCCAC
CCCGGCCGCC TCTACCGCCG CGGCCCCGCC ACGATCACCG ACCTCATCGC GGGCACGCGC
TGCTGGACCG ACCGTGAGTT CCTGGTCCAC GGCGAGCGCC GGATCTCCTA TGCCGCATTC
CGCGGCGCAC TCGGCCCGGT CGGCGCCCAT CTCGCCGATC TCGGGGTGGG GCCGCGCGAC
CGGGTGATGG TCTTCGGCTA CAACAGCCCG GAGTGGATCG TGGCCGTGTT CGCCCTCCTT
CTGCAGGGGG CGGTTCCGGT GCTCGGCAAC CGGTGGTGGA GCCCCGCCGA GGTGGCCCAT
GCCGCCGAAC TGCTCGACCT GCGGCACATC TTCACCGACA CCGCGCTCGA CACCGATCGC
CCGGCCAGCC CGCTCGCCGA CCTGGCGTAC GCATTCGACG CACCGGCCGG TCCGGCGTCG
CACGCCGATG AAGACGTCGA CATCGACGAG GTCGCGATCG TCCTGTTCAC CTCCGGCAGC
TCCGGGCTGC CGAAAGCCGT CGAGCTGTCC CGCCGTTCGG TGATCGCCAA CCAGCAGAAC
ATCCTGACGC GCAACGGCAG GCTGCCCCAC CTGCTGAACG CCGACTCCCC GCAGGCCGTC
AGCCTCGCGA GCACGCCGAT GTTCCACATC GGCGGCCTGT CGAGCCTGCT CACGCATTTC
CTGACCGGCG GCCGAATCGT GTTGGCGCAG GGCCGGTTCG ACCCCGGCCA GGTGATGGCG
CTCGTCGAAC GCGAACGGGT GCAGGTCTGG GGCGCGGTGC CCACCATGGC CGTGCGCGTC
CTCGAACACC CCGAGTTCGG GTCCCGCGAC CTGAGCAGCC TGCGGTCGTG GCCGCTGGGG
GGCGCTCCGG TGAGCCCCGA ACTCCTCGAA CGCATCCGCA CGCAGCTGCC CACCCTGCGT
GAGCGTGGGC TCTCCAACAC CTGGGGCATG ACCGAGGCCG GCGGCTTCCT CACCGTCGCC
GACAGCCGGG ACCTGCGCGC GAGGCCGGGC ACGGTGGGCA GGCCCTATCC CGTCGTCGAG
TTGCGCATCG ACCGGCCCGA CGACGACGGC GTCGGCGAAG TGCTGGCCCG CTCCCCCACC
GTGATGCTGG GTTACGCGGG TCGCGCGGAC GACGACACCG TCGACGCCGA CGGCTGGTTG
CACACCGGCG ACCTCGGCCA CCTCGACGAC GACGGCTATC TCTACATCGA CGGCCGCAGC
AAGGACGTCG TGATCCGCGG CGGTGAGAAC ATCGCCTGCC CGCACGTCGA GGCGGCGCTC
GCCAGCCATC CGGCCGTCGT CGAGGCCGCG GCCCTGGGCC TGCCCCATCC CGACCTGGGC
GAAGAGCTCG CCGCGGTGGT CGTCTACCGC AGCGGTGCAC TGCCGCCGAC CGACGACGAG
CTGCGGCGCC ACCTCGCGGG CATCGTGTCG TCGTTCGCCG TCCCGACCCG CTGGCTCATC
CGGACCGAAC CGCTCCCCAC GCTCGCCGGG GAGAAGATCG ACAAGAAAAC CCTGGCGACC
GCATTCGACT GA
|
|---|
| Protein sequence | MTDLRPLWDT EAFSGVYAGH PGRLYRRGPA TITDLIAGTR CWTDREFLVH GERRISYAAF
RGALGPVGAH LADLGVGPRD RVMVFGYNSP EWIVAVFALL LQGAVPVLGN RWWSPAEVAH
AAELLDLRHI FTDTALDTDR PASPLADLAY AFDAPAGPAS HADEDVDIDE VAIVLFTSGS
SGLPKAVELS RRSVIANQQN ILTRNGRLPH LLNADSPQAV SLASTPMFHI GGLSSLLTHF
LTGGRIVLAQ GRFDPGQVMA LVERERVQVW GAVPTMAVRV LEHPEFGSRD LSSLRSWPLG
GAPVSPELLE RIRTQLPTLR ERGLSNTWGM TEAGGFLTVA DSRDLRARPG TVGRPYPVVE
LRIDRPDDDG VGEVLARSPT VMLGYAGRAD DDTVDADGWL HTGDLGHLDD DGYLYIDGRS
KDVVIRGGEN IACPHVEAAL ASHPAVVEAA ALGLPHPDLG EELAAVVVYR SGALPPTDDE
LRRHLAGIVS SFAVPTRWLI RTEPLPTLAG EKIDKKTLAT AFD
|
|---|
| |