Gene Mjls_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3015 
Symbol 
ID4881540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3149784 
End bp3151181 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content72% 
IMG OID640140314 
Productmajor facilitator transporter 
Protein accessionYP_001071285 
Protein GI126435594 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.503984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0182564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA CCTCGCGCGT CTCGGTGGGC ACCTGGCGCG ACCTGCTGGG CCCGGCTCAC 
CTCGGTGCGT CGACGGTGCT GGCGGGCGGT GTCGCGCTGT ATGCGACCAA CGAGTTCCTC
ACCATCAGCC TGATGCCGAG CGCCGTCGCC GACATCGGCG GTCAGCGGTT CTACGCCTGG
GTGACGACGG TGTACCTGGT CGCCTCGGTG ATCGCCGCGA CGACCGTGCA CCCGCTCCTG
ATGCGCCTGG GGCCGCGGCG GGCGTACTGG TCGGGTCTGA GCGTGTTCGC GGCCGGCAGC
CTGGGCTGTG CACTCGCCCC GACGATGGAG TGGCTCCTCG TCGGCCGGAC GGTGCAGGGT
GCGGCCGGTG GCCTGCTCGC CGGACTCGGG TACGCCGTGA TCAACACCGC GCTGCCGAGC
CGGTTGTGGA CGCGCGCATC GGCGTTGGTG TCCGCCATGT GGGGAGTCGG GACACTCGTC
GGCCCCGCCG CGGGTGGGCT GTTCGCCCAG GTCGGCAGTT GGCGGTGGGC GTTCGGCGTG
TTGGTCGGGC TCACCGTCGC GATGGGGGTG CTGGTGCCGT TCGCGCTTCC GGACCGGGTC
GATGGCACCG ATGCCGAGCG GCCCCGCCTG CGAATCCCGC TGTGGTCGCT GCTGTTGCTG
GGTGCGGCGG CGTTGATAGT CAGCATGGCC GGAATCCCGC ACGATGTGCG GGCCACGGCC
GGACTGCTCC TCGCCGGCGT CGCCATCGTG GTGGTGTTCG TGGTCGTGGA CCGTCGCGCC
ACCGTTGCGG TGTTGCCGCC CAGCGCTTTC GGCCGTGGCC CCCTGAAGTG GATCTACGCG
ACGCTGGGCC TGCTGATGGC CGCGACGATG GTCGACATGT ACGTTCCGTT GTTCGGGCAG
CGTCTCGCCG GTATGGCGCC TGTCGTCGCA GGGTTCTTCG GCGCGGTGCT CTCCGTCGGC
TGGACGGGCG GCGAGATCAC GAGTGCCTCG CTGAGCCGCG CGCGGGTGAT CGTGCGCACG
GTCGCGTCTG CCCCGCTCGT CATGGCCGCC GGGCTGACTC TCGGCATGTT CGCGCTGCGC
GACGAGATGT CGCCGGGCTG GGCTGCGCTG TGGGCGGTCG GGCTGCTCGT CACCGGTACC
GGCATCGGGA TCGCCTGGCC CCACCTGTCC GCATGGGCGA TGAGTCGCGT CGACGATCCG
GCCGAGGGGC CCGCGGCCGC CGCGGCGATC AACACGGTCC AACTCATCTG CGGAGCCTTC
GGCGCCGGTC TGGCGGGTGT CGTCGTCAAC CTCACCGACG CCGGCAACGC GACCGCGGCG
CGTTGGCTGT TCGCCGCGTT CGCGGGATTC GTCGCCGTCG GCGTCCTCGC GTCCACCCGG
AGCTGCCGAA CCCGTTGA
 
Protein sequence
MTDTSRVSVG TWRDLLGPAH LGASTVLAGG VALYATNEFL TISLMPSAVA DIGGQRFYAW 
VTTVYLVASV IAATTVHPLL MRLGPRRAYW SGLSVFAAGS LGCALAPTME WLLVGRTVQG
AAGGLLAGLG YAVINTALPS RLWTRASALV SAMWGVGTLV GPAAGGLFAQ VGSWRWAFGV
LVGLTVAMGV LVPFALPDRV DGTDAERPRL RIPLWSLLLL GAAALIVSMA GIPHDVRATA
GLLLAGVAIV VVFVVVDRRA TVAVLPPSAF GRGPLKWIYA TLGLLMAATM VDMYVPLFGQ
RLAGMAPVVA GFFGAVLSVG WTGGEITSAS LSRARVIVRT VASAPLVMAA GLTLGMFALR
DEMSPGWAAL WAVGLLVTGT GIGIAWPHLS AWAMSRVDDP AEGPAAAAAI NTVQLICGAF
GAGLAGVVVN LTDAGNATAA RWLFAAFAGF VAVGVLASTR SCRTR