Gene Mjls_2998 details

Gene Information

• Locus tag: Mjls_2998
• Symbol: lysS
• ID: 4878711
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. JLS
• Kingdom: Bacteria
• Replicon accession: NC_009077
• Strand: +
• Start bp: 3127563
• End bp: 3130898
• Gene Length: 3336 bp
• Protein Length: 1111 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640140296
• Product: lysyl-tRNA synthetase
• Protein accession: YP_001071268
• Protein GI: 126435577
• COG category: [J] Translation, ribosomal structure and biogenesis; [S] Function unknown
• COG ID: [COG1190] Lysyl-tRNA synthetase (class II); [COG2898] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.604901
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.107077
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCTCA CCAGTCCGCC GAGGACGCGC GCCGACTCCC GCCACTCCTG GGTTCCCGCG 
GCCGCCGGGT GGACCGTCGG CGTCATCGCC ACCCTCTCGC TCATCGCGAG CGTCTCACCG 
CTGGTCCGGT GGATCATCCG GGTGCCGCGA GAGTTCGTCA ACGACTACAT CTTCAACTTC 
CCCGACACCA GCTTCGCCTG GGCGTTCGTG CTGGCGCTGC TGGCGGGCGC GCTGGCCGCC 
CGCAAACGCA TCGCCTGGTG GATTCTGCTG CTGTACATGG TCGCCGCGGT CGGCTGGAAC 
GTCGCCGATC TGCTGACCGG TGACGAATCG GTCGTCGAGG AGATGGGCGA GGTCATCGGC 
CTCGCCTTCC ACCTTGCGGC CGTGGCCTTC CTGCTGTTGG CCCGCCCGCT GTTCTGGGCC 
CGCGTGCGGC GCGGCGCCCT GTTCAAGGCG GCCGGTGTGC TGGCCGCCGG AATGGCGGTC 
GGCGTGCTCG TCGGCTGGGG TCTGCTCGAA CTGTTCCCCG GCGACCTCGA ACGCGACTAC 
CGCTTGGCAT ACGCGGCGAA CCGGGTGTTC GCGTTCGCCG GCGTCGACCC CGACGCGTTC 
GACGGACAAC ACCCACACGT GGTCGTCAAC GCCCTGCTCG GGTTGTTCGG CGCGCTGGCG 
TTGATGGCCG CGGCGATCGT GCTGTTCCAG TCGCAGCGCT CCGAGAACGC GCTCACCGGC 
GAAGACGAAT CGGCCATCCG CGGTCTGCTC GAGCTCTACG GCAAGAACGA CTCGCTGGGG 
TATTTCGCCA CCCGGCGGGA CAAGTCCGTG GTGTTCGCAC CGAACGGACG CGCCGCGATC 
ACCTACCGGG TCGAGGTGGG GGTCTGCCTG GCCAGCGGTG ACCCGGTCGG CGACCCGAAA 
GCCTGGCCGC AGGCGATCGA CGCGTGGCTG GCGCTGTGCG GGACGTACGG CTGGGCACCG 
GGTGTCATGG GTGCCAGCGT GGGCGGGGCC GAGGCGTTCC GGGCCGCCGG ACTCAGCGCG 
ATCCAACTGG GCGACGAGGC CATCCTGCAT CCGGACAGCT TCCGGCTCTC CGGGCCGGAC 
ATGCGGGCGG TGCGCCAGGC CGTCACGCGG GCCCGCCGCG CCGGGGTGAC CGTGCGGATC 
CGCAGACACC GGGAGCTCTC ACCCGAACAG ATGGCCGAGG TGATCGCCCA CGCCGACGCC 
TGGCGCGACA CCGAGACAGA ACGCGGCTTC TCGATGGCGC TCGGCCGCCT CGGCGATCCC 
GCCGACAGCG ACTGCCTGCT GGTGGAGGCC GTCCAGGGCG AGACCGGGGG CGAGCGAAGC 
GACCCGGGGA GTGGCACCGT CGTGGCCATG TTGTCGCTGG TGCCGTGGGG CAGCAACGGC 
GCCTCCCTCG ACGTGATGCG GCGTTCCCCG CAGTCACCCA ACGGCACCAT CGAGTTGATG 
GTCAGCGAGC TGTGCATGCA GGCCGAGGAC ATCGGCGTCA CCCGCATCTC CCTGAACTTC 
GCGATGTTCC GGTCGGCGTT CGAGCAGGGC GCGCAACTCG GCGCCGGACC CGTGGCCCGG 
CTGTGGCGCT GGCTGCTGGT CTTCTTCTCC CGGTGGTGGC AGCTGGAGAC GCTGTACCGC 
TCGAACATGA AATACCAACC GCAGTGGGTG CCGCGCTACG CCTGCTACGA GGACGCGCGC 
CTCATCCCCC GCGTCGGGGT GGCATCGGTG ATCGCCGAGG GCTTCCTGGT GCTGCCGTTC 
TCGCGGCGCA ACAAACAACA CACCGGCCAC CACACGTCCG CACCGCAGGA CCTGGTCGCC 
AGCGGCGTGC TCCACCACGA CGGCACCGCA CCCGACATGT CCGGGTTGCG CACCGACACC 
GCCGACGACG AACCGCCCCG GCTGCCCGAG CAGGTGCGGG TCCGGATGGC GAAACTCAAG 
GCGCTGCAGG CCGACGGCGT CGACGCCTAT CCGGTCGGCC GGCCACCCAG CCACACCGCG 
GCGGCTGCCG TCGACTCCCC CGACGACGTC GAACTCGATG TCGCCGGCCG GGTGCTGCGC 
ATCCGCGACT ACGGCGGTGT GCTGTTCGCC CAGTTACGGG ACTGGTCGGG TGAAGTGCAA 
CTGCTGCTGG ACAATTCGAC ACTCGAGCAG GGCAGCACCG CCGACTTCAC CGCGGCCATC 
GACCTCGGCG ACCTCATCGA GGCGACCGGC ACCATGGGCT ACAGCAAGAA CGGGACCCGC 
TCGCTGCTGG TGCGGCACTG GCGGCTCACC GGTAAATGCC TGCGTCCCCT GCCGGACAAG 
TGGAAGGGCC TGACCGATCA GGAGGCCCGC GTCCGGGCCC GCTACGTCGA CCTGGCGGTC 
AACACCGAGG CGCGGGATCT GATCCGGGCC CGCAGCGGCG TGCTGCACGC GATCCGGGAC 
ACGCTGTACC ACAAGGGTTT CCTCGAGGTC GAGACCCCGA TCCTGCAGCA GATCCACGGC 
GGCGCCAACG CACGGCCGTT CCTGACCCAC ATCAACGCCT ACGACCTGGA CCTGTATCTG 
CGCATCGCGC CCGAGCTGTA TCTCAAGCGG CTCTGCGTCG GTGGGGTGGA GCGGGTCTTC 
GAACTCGGCC GCGCGTTCCG CAACGAAGGC GTCGACTTCT CCCACAACCC CGAATTCACA 
CTGCTGGAGG CGTATCAGGC GCACGCCGAC TACCACGTGT GGATCGACGG GTGCCGTGAA 
CTCATCCAGA ACGCCGCGAT GGCCGCCAAC GGTGAGCACG TGTTCCTCCG TCCGCGTGAC 
GACGGCGTCC TCGAACCCGT CGACATCTCC GGACCGTGGA CGGTCAAGAC GGTGCACGAT 
GCGGTGTCCG AGGCGCTCGG CGAACACATC GACGCCGCCA CGGAACTGCC GACGCTGCGC 
AAGCTGGCCG ACGCGGCGGG CATCCCCTAT CTGACCCACT GGGACGAGGG GGCGGTGGTG 
CTCGAGATGT ACGAGCACCT GGTCGAGGAC CGCACCGAGA AGCCGACGTT CTACAAGGAC 
TTCCCGACGT CCGTATCCCC CTTGACGCGC CCGCATCGCA GCATTGCCGG CGTCGCCGAA 
CGGTGGGACC TCGTCGCCTG GGGTGTCGAA TTGGGCACCG CCTACAGCGA ACTCACCGAT 
CCGGTGGAGC AGCGTCGTCG ACTGCAGGCG CAGTCGCTGC TCGCCGCGGG CGGTGATCCG 
GAGGCGATGG AACTCGACGA GGACTTCCTG CAGGCCATGG AGTACGCGAT GCCGCCCACC 
GGTGGGCTGG GCATGGGTGT CGATCGGGTG GTCATGCTGA TCACCGGCCG CAGCATCCGG 
GAGACGCTTC CGTTCCCGTT GGCCAGACCA CGTTGA 

 

Protein sequence

MTLTSPPRTR ADSRHSWVPA AAGWTVGVIA TLSLIASVSP LVRWIIRVPR EFVNDYIFNF 
PDTSFAWAFV LALLAGALAA RKRIAWWILL LYMVAAVGWN VADLLTGDES VVEEMGEVIG 
LAFHLAAVAF LLLARPLFWA RVRRGALFKA AGVLAAGMAV GVLVGWGLLE LFPGDLERDY 
RLAYAANRVF AFAGVDPDAF DGQHPHVVVN ALLGLFGALA LMAAAIVLFQ SQRSENALTG 
EDESAIRGLL ELYGKNDSLG YFATRRDKSV VFAPNGRAAI TYRVEVGVCL ASGDPVGDPK 
AWPQAIDAWL ALCGTYGWAP GVMGASVGGA EAFRAAGLSA IQLGDEAILH PDSFRLSGPD 
MRAVRQAVTR ARRAGVTVRI RRHRELSPEQ MAEVIAHADA WRDTETERGF SMALGRLGDP 
ADSDCLLVEA VQGETGGERS DPGSGTVVAM LSLVPWGSNG ASLDVMRRSP QSPNGTIELM 
VSELCMQAED IGVTRISLNF AMFRSAFEQG AQLGAGPVAR LWRWLLVFFS RWWQLETLYR 
SNMKYQPQWV PRYACYEDAR LIPRVGVASV IAEGFLVLPF SRRNKQHTGH HTSAPQDLVA 
SGVLHHDGTA PDMSGLRTDT ADDEPPRLPE QVRVRMAKLK ALQADGVDAY PVGRPPSHTA 
AAAVDSPDDV ELDVAGRVLR IRDYGGVLFA QLRDWSGEVQ LLLDNSTLEQ GSTADFTAAI 
DLGDLIEATG TMGYSKNGTR SLLVRHWRLT GKCLRPLPDK WKGLTDQEAR VRARYVDLAV 
NTEARDLIRA RSGVLHAIRD TLYHKGFLEV ETPILQQIHG GANARPFLTH INAYDLDLYL 
RIAPELYLKR LCVGGVERVF ELGRAFRNEG VDFSHNPEFT LLEAYQAHAD YHVWIDGCRE 
LIQNAAMAAN GEHVFLRPRD DGVLEPVDIS GPWTVKTVHD AVSEALGEHI DAATELPTLR 
KLADAAGIPY LTHWDEGAVV LEMYEHLVED RTEKPTFYKD FPTSVSPLTR PHRSIAGVAE 
RWDLVAWGVE LGTAYSELTD PVEQRRRLQA QSLLAAGGDP EAMELDEDFL QAMEYAMPPT 
GGLGMGVDRV VMLITGRSIR ETLPFPLARP R