| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2817 |
|---|
| Symbol | |
|---|
| ID | 4878531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2924702 |
|---|
| End bp | 2925622 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640140112 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001071088 |
|---|
| Protein GI | 126435397 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0275474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCGG ACGAGCTGTT CCAGCGGGCG GTGATCGCGC GCCGCTACTA CCTCGAGGGG
CGGACGAGGA TCCAGATCGC CGAGGAGTTC GGACTCTCCC GGTTCAAGGT CGCGCGAATG
CTCGACGAGG CCCTCGAATC CGGGATGGTG GAGATCAAGA TCCACAACCC CGGCGCGGTC
GACGTCGACC TGTCCACCGA ACTGCAGCGC CGCTACGGCC TCGAACACGC CTACGCCGTC
GCGTGCGACA CCTCCACCGC AGCCGACCGC ATCGAAGCCG TGGCCAAGGC GATGGCCGAG
TTGCTGCAGT CGATCCTGCG GAACGGCGAC GTGGTGGGGG TCGACTGCGG GCGCACGCTC
ACCCACATCG CCGCGCACCT GACGTCGTTG CCGCCGTGCG ATGTCGTCCA ACTCACCGGG
ATGGCCGGCG CGATCACCTC GAACGGGGCC GACCTGGTCC GCCGGATCAG CGAGATCAGC
GGGGGCCGCT CCTGGCCGAT GTACGTGCCG CTCGTGGTGC CCGATGCGCG CACCGCCGAA
AGCCTCAGCG GCAACCAGCA ATTGCAGGAG ACGGTGGCCC GGCACCGTGA CGTCAGTTGC
GCCATCATCT CCGTGGGCGC CTGGAGTCCC GGCGCCTCAC AGGTGTACCA GTCGCTGACG
CCCGAGGAGA TCGGGGCACT CGACGCCGCC GGTGTCTGCG CCGAGACGTG CGCCCTGCTG
CTCGACGCCG ACGGCAACCG CGTCCCCGGC CTCGACGAGC GGCGGATGGG GATCGCCGAG
GACACCCTGC GGTCCATCCC GACGAGGATC GCGCTCGCGA CCGGCCCCGA GAAGATCGAC
GCGACCCGTG CGGTCCTGCG GTCCGGGCTG GTCTCGTCTC TGGTCACCGA CATCGACGTG
GCCGCCGCGG TACTGAACTG A
|
|---|
| Protein sequence | MGPDELFQRA VIARRYYLEG RTRIQIAEEF GLSRFKVARM LDEALESGMV EIKIHNPGAV
DVDLSTELQR RYGLEHAYAV ACDTSTAADR IEAVAKAMAE LLQSILRNGD VVGVDCGRTL
THIAAHLTSL PPCDVVQLTG MAGAITSNGA DLVRRISEIS GGRSWPMYVP LVVPDARTAE
SLSGNQQLQE TVARHRDVSC AIISVGAWSP GASQVYQSLT PEEIGALDAA GVCAETCALL
LDADGNRVPG LDERRMGIAE DTLRSIPTRI ALATGPEKID ATRAVLRSGL VSSLVTDIDV
AAAVLN
|
|---|
| |