| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2588 |
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| Symbol | |
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| ID | 4878304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 2714227 |
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| End bp | 2715105 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640139885 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001070861 |
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| Protein GI | 126435170 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.194779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAA AACTCGACGG CAAGGTCGCT TTCATCACCG GCGCGGCCCG CGGCCAGGGG
CGGGCGCACG CGATCGCGAT GGCCAGGGAG GGTGCCGACA TCATCGCGGT CGACATCTGC
CGCGACATCC CGTCCAACCC GTATCCACTC GCCACCCCGG AAGACCTCGC CGAAACCGAG
CGTTCCGTCA AGGAGATCGG CAGACGCGTC GTCGCGCGGA TCGCCGACGT CCGGGAACGC
CACGAACTGC GCGATGCGGT CGACGCCGGT CTGGCGGATC TGGGCAGGAT CGACATCGTC
GTCGCGAACG CGGGAATCCT TCCGATGGCG ATGGGCAATC CCGACCCGAT GGGGTTCGTC
GACGCCTCCG ACGTCGACCT GCTCGGGGTG ATGAACACCG TCGCGGTCGC CATCCCGCAC
CTTCCGGACG GCGCCTCGAT CATCGTCACC GGCTCGACCG CGGGCATGAT CCGCGGGACC
ACCACCAGCC CGGACATGGG TCCCGGGGGC GCCGGCTACG GATGGAGCAA GCGGATAGTC
ATGGAGTACG TCGACGAGAT GTGTCTCCAC CTGGCGCCCA GGATGATTCG TATCAACGCG
ATCCATCCGA CGAACTGCAA CACCCACCTG TTGCAGAACG AGGGCATGTA CGGCGTGTTC
CGGCCTGATC TGAAGGCCGA GGGCAAGACG CCCACCCGCG AGGACGCCGA ACCGCTGTTC
AACCTGTTCC AGGCCATGCC GATCCCGTAC ATCGAACCGG AGGACATGGC CAACCTCGGC
GTGTTCCTCG CCTCCGACGA CAGCCGCTAC ATCACCGGTC AGCACATCCG CGTCGACGCC
GGGTCGCTGC TGAAGTGGCC CAACGGACCC GGTGGCTAG
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| Protein sequence | MTGKLDGKVA FITGAARGQG RAHAIAMARE GADIIAVDIC RDIPSNPYPL ATPEDLAETE
RSVKEIGRRV VARIADVRER HELRDAVDAG LADLGRIDIV VANAGILPMA MGNPDPMGFV
DASDVDLLGV MNTVAVAIPH LPDGASIIVT GSTAGMIRGT TTSPDMGPGG AGYGWSKRIV
MEYVDEMCLH LAPRMIRINA IHPTNCNTHL LQNEGMYGVF RPDLKAEGKT PTREDAEPLF
NLFQAMPIPY IEPEDMANLG VFLASDDSRY ITGQHIRVDA GSLLKWPNGP GG
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