Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2390 |
Symbol | aroE |
ID | 4878108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2499325 |
End bp | 2500143 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640139689 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001070665 |
Protein GI | 126434974 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase [TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.450055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0474327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAGATC GGCGGCCCGA CAGCGCGCGT AAGGCGGCCG TCCTCGGCTC ACCGATCGCG CACTCGCGGT CACCGCAGTT GCACCTCGCG GCCTACCGTG CGCTCGGCCT GACCGACTGG ACCTACGAAC GCATCGAGTG CACCGCCGAA CAACTGCCCG GGCTGGTCGG CCGATTCGGC CCGGAGTGGG TCGGGGTCTC GGTGACGATG CCGGGCAAAT TCGCCGCGCT GCGCTTCGCC GACGAACGCA CCGAACGCGC GGAGTTGGTC GGGTCGGCCA ACACCCTGGT CCGCACACCG AACGGGTGGC GGGCCGACAA CACCGACGTC GACGGTGTGG CCGGGGCGCT GGGAAACGTC GACGGGCCGG GGATCGTCGT GGGCTCCGGC GGGACCGCTC CGGCCGCCGT GGTGGCGCTC GCCGGACTCG GCGCCACCCG TCTCACGATC GCCGCCCGCA ACGCGGACAA GGCGGCGTCG CTGGTCGACC TGGCGCACCG CCTCGGCGTC ACCGCGCGGT GGTGCGACCT CGACGACCCG GACCTGACCG CACTCGCGGC GGCCGCCGGT GCGGTCGTCA GCACCGTCCC CGCCGACGTG GCGCAGCGGT ATGCGGCGAC GTTCGCGGGC ACGCCGGTCC TGCTCGACGC GATCTACGAT CCGTGGCCGA CACCGCTGGC GGCGGCGGTG CAGGCCGCGG GCGGCCGCGT GATCGGCGGG CTGCAGATGC TGCTGCACCA GGCCTTCGCG CAGGTCGAAC AGTTCACCGG CCTGCCGGCG CCGAAAGAGG CGATGAGGGC GGCGCTGCAG ACCGCTTAG
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Protein sequence | MPDRRPDSAR KAAVLGSPIA HSRSPQLHLA AYRALGLTDW TYERIECTAE QLPGLVGRFG PEWVGVSVTM PGKFAALRFA DERTERAELV GSANTLVRTP NGWRADNTDV DGVAGALGNV DGPGIVVGSG GTAPAAVVAL AGLGATRLTI AARNADKAAS LVDLAHRLGV TARWCDLDDP DLTALAAAAG AVVSTVPADV AQRYAATFAG TPVLLDAIYD PWPTPLAAAV QAAGGRVIGG LQMLLHQAFA QVEQFTGLPA PKEAMRAALQ TA
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