Gene Mjls_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2390 
SymbolaroE 
ID4878108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2499325 
End bp2500143 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content74% 
IMG OID640139689 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001070665 
Protein GI126434974 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.450055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0474327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGATC GGCGGCCCGA CAGCGCGCGT AAGGCGGCCG TCCTCGGCTC ACCGATCGCG 
CACTCGCGGT CACCGCAGTT GCACCTCGCG GCCTACCGTG CGCTCGGCCT GACCGACTGG
ACCTACGAAC GCATCGAGTG CACCGCCGAA CAACTGCCCG GGCTGGTCGG CCGATTCGGC
CCGGAGTGGG TCGGGGTCTC GGTGACGATG CCGGGCAAAT TCGCCGCGCT GCGCTTCGCC
GACGAACGCA CCGAACGCGC GGAGTTGGTC GGGTCGGCCA ACACCCTGGT CCGCACACCG
AACGGGTGGC GGGCCGACAA CACCGACGTC GACGGTGTGG CCGGGGCGCT GGGAAACGTC
GACGGGCCGG GGATCGTCGT GGGCTCCGGC GGGACCGCTC CGGCCGCCGT GGTGGCGCTC
GCCGGACTCG GCGCCACCCG TCTCACGATC GCCGCCCGCA ACGCGGACAA GGCGGCGTCG
CTGGTCGACC TGGCGCACCG CCTCGGCGTC ACCGCGCGGT GGTGCGACCT CGACGACCCG
GACCTGACCG CACTCGCGGC GGCCGCCGGT GCGGTCGTCA GCACCGTCCC CGCCGACGTG
GCGCAGCGGT ATGCGGCGAC GTTCGCGGGC ACGCCGGTCC TGCTCGACGC GATCTACGAT
CCGTGGCCGA CACCGCTGGC GGCGGCGGTG CAGGCCGCGG GCGGCCGCGT GATCGGCGGG
CTGCAGATGC TGCTGCACCA GGCCTTCGCG CAGGTCGAAC AGTTCACCGG CCTGCCGGCG
CCGAAAGAGG CGATGAGGGC GGCGCTGCAG ACCGCTTAG
 
Protein sequence
MPDRRPDSAR KAAVLGSPIA HSRSPQLHLA AYRALGLTDW TYERIECTAE QLPGLVGRFG 
PEWVGVSVTM PGKFAALRFA DERTERAELV GSANTLVRTP NGWRADNTDV DGVAGALGNV
DGPGIVVGSG GTAPAAVVAL AGLGATRLTI AARNADKAAS LVDLAHRLGV TARWCDLDDP
DLTALAAAAG AVVSTVPADV AQRYAATFAG TPVLLDAIYD PWPTPLAAAV QAAGGRVIGG
LQMLLHQAFA QVEQFTGLPA PKEAMRAALQ TA