| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2347 |
|---|
| Symbol | aspS |
|---|
| ID | 4881529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2451496 |
|---|
| End bp | 2453268 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640139647 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001070623 |
|---|
| Protein GI | 126434932 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.138721 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGCA GTCATGCCGC CGGATCGCTG CGACCCGCCG ACGCCGGTCA GAACGTGACG
CTGGCCGGTT GGGTGGCTCG TCGGCGCGAT CACGGTGGTG TCATCTTCAT CGACCTGCGC
GACGCGTCCG GGGTGTCGCA GGTGGTCTTC CGCGAGGGTG CGGTGCTCGA GGCGGCCCAC
CGGTTGCGCG CCGAGTTCTG CGTGGCCGTC GAGGGCGTCG TCGAGGTGCG TCCGGAGGGC
AACGAGAACC CCGAGATCCC GACCGGCGGC ATCGAGGTCA ACGCCACCTC GCTGACCGTG
CTCGGCGAGA GCGCCCCGCT GCCGTTCCAG CTCGACGACG AGGCCGGTGA GGAGGCCCGG
CTGAAATACC GCTACCTCGA CCTGCGCCGC GAAGGCCCCG GCAAAGCCCT CCGGCTGCGG
TCGAAGGTGA ACGCCGCCGC GCGCGAGGTG CTGGCGCGCC ACGACTTCGT CGAGATCGAG
ACACCGACGA TGACGCGGTC CACCCCCGAG GGCGCGCGGG ACTTCCTGGT GCCCGCGCGG
TTGCAGCCCG GTTCGTTCTA CGCGCTGCCG CAGAGCCCGC AGCTGTTCAA GCAGCTGCTC
ATGGTCGCGG GCATGGAGCG GTACTACCAG ATCGCGCGGT GCTACCGCGA CGAGGACTTC
CGCGCCGACC GTCAACCCGA GTTCACCCAG CTCGACATGG AGATGAGCTT CGTCGACGCC
GACGACGTCA TCGCGGTGTC CGAGGAGATC CTCAAGGCGC TGTGGGCGCT CATCGGCCAC
GACCTGCCCA CCCCGCTGCC GCGCATCACC TACGCCGAGG CGATGCGCCG GTTCGGTACC
GACAAACCCG ATCTGCGGTT CGGCCTCGAA CTCGTCGAGT GCAAGGAGTT CTTCGCCGAC
ACCACCTTCC GGGTCTTCCA GGCGCCCTAC GTCGGCGCCG TGGTGATGCC CGGCGGGGCG
TCGCAGCCGC GCCGCACCCT CGACGGCTGG CAGGAGTGGG CCAAACAGCG CGGCGCCAAG
GGGCTGGCCT ACGTACTGGT CGGCGACGAC GGCACGCTGG GCGGGCCCGT CGCCAAGAAC
CTCACCGACG CCGAACGCGA CGGCCTGGCC GCCCACGTCG GCGCCAACCC CGGCGACTGC
ATCTTCTTCG CGGCCGGCCC GCCCAAGTCG TCGCGGGCGC TGCTGGGCGC CGCGCGCATC
GAGATCGCCA AACGCCTCGA CATGATCGAC CCCGACGCGT GGGCCTTCAC CTGGGTGGTC
GACTGGCCGC TGTTCGAGAT GGCCGAGGAC GCCACGGCCG CCGGTGACGT CGCGGTCGGC
TCCGGGGCGT GGACCGCGGT GCACCACGCG TTCACCGCGC CGCAGCCGCA GTCCGAGGCC
ACCTTCGACA CCGACCCGGC CGGTGCGCTG GCCGACGCCT ACGACATCGT CTGCAACGGC
AACGAGATCG GCGGCGGCTC GATCCGTATC CATCGCCGCG ACGTGCAGGA GCGGGTGTTC
GCGATGATGG GCATCGAACA CGACGAGGCG CAGGAGAAGT TCGGATTCCT GTTGGACGCC
TTCACCTTCG GGGCCCCGCC GCACGGTGGT ATCGCCTTCG GCTGGGACCG CATCACCGCG
TTGCTGGCGC GGATGGACTC GATCCGCGAG GTGATCGCGT TCCCCAAGTC CGGCGGCGGA
GCCGATCCGC TGACCGGTGC GCCCGCGCCG ATCACCCCGC AGCAGCGCAG GGAGTCGGGT
ATCGACGCCA AACCGAAGAA GGACGGCGAA TAG
|
|---|
| Protein sequence | MLRSHAAGSL RPADAGQNVT LAGWVARRRD HGGVIFIDLR DASGVSQVVF REGAVLEAAH
RLRAEFCVAV EGVVEVRPEG NENPEIPTGG IEVNATSLTV LGESAPLPFQ LDDEAGEEAR
LKYRYLDLRR EGPGKALRLR SKVNAAAREV LARHDFVEIE TPTMTRSTPE GARDFLVPAR
LQPGSFYALP QSPQLFKQLL MVAGMERYYQ IARCYRDEDF RADRQPEFTQ LDMEMSFVDA
DDVIAVSEEI LKALWALIGH DLPTPLPRIT YAEAMRRFGT DKPDLRFGLE LVECKEFFAD
TTFRVFQAPY VGAVVMPGGA SQPRRTLDGW QEWAKQRGAK GLAYVLVGDD GTLGGPVAKN
LTDAERDGLA AHVGANPGDC IFFAAGPPKS SRALLGAARI EIAKRLDMID PDAWAFTWVV
DWPLFEMAED ATAAGDVAVG SGAWTAVHHA FTAPQPQSEA TFDTDPAGAL ADAYDIVCNG
NEIGGGSIRI HRRDVQERVF AMMGIEHDEA QEKFGFLLDA FTFGAPPHGG IAFGWDRITA
LLARMDSIRE VIAFPKSGGG ADPLTGAPAP ITPQQRRESG IDAKPKKDGE
|
|---|
| |