| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2150 |
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| Symbol | dapF |
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| ID | 4877870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 2248527 |
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| End bp | 2249408 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640139447 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001070427 |
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| Protein GI | 126434736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0239375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTCG CCAAAGGTCA CGGGACGCAG AACGACTTCG TGCTGCTGCC CGATCTCGAC
GCCCGGCTGG CTCTGACGCC GGCCGTCGTC TCCGCGCTGT GCGACCGGCG CCGCGGGCTC
GGCGCCGACG GCGTGCTGCG GGTCACCACC GCGAAGGCGG CACTGTCGGC CGGTGTGTTC
GAGCGGCTCC CCGAGGGTGT CGGGGCCGGC GACTGGTACA TGGACTACCG CAATGCGGAC
GGGTCGATCG CCCAGATGTG CGGTAACGGC GTGCGCGTGT TCGCCCACTA CCTGCGCGCG
GCGGACCTGG AGTCGCGCGA CGAGTTCGTC GTGGGGTCGC TGGCCGGGCC GCGGCCCGTC
GTCCTGCACG GCTTCGACCT GGCCCACCGG TCGCGGGCCG AGGTGACCGT CGAGATGGGC
AAGGTCAACC TGCTCGGCAG CGGGTCGGCG GTGGTCGGCG GGCGCCGATT CACCGGGCTG
GGAATCGACG TCGGCAATCC GCACCTGGCC TGCGTCGACA CGACGCTGAC CGAGGCTGAA
CTCGCGGCGC TCGACGTGGC CGCCCCGGTC GACTTCGACC CCGCCCAGTT CCCGGACGGG
GTCAACGTCG AGGTGCTCAC CGCGCTGCGC GATGGGGCGG TGTCGATGCG GGTACACGAA
CGGGGTGTGG GCGAAACGCG TTCGTGCGGT ACCGGGACAG TCGCTGCCGC CGTCGCGGCG
TTGGCCCAGG AGGGAGCCGC GGTGGGCACG CTCGACGTCC GCATCCCCGG TGGCGTGGTC
ACCGTCTCGG TCACCGACAC CACGAGTTTC CTGCGCGGAC CGTCGGAACT GGTCGCCACC
GGCGAACTCG CCGGGGAATG GTGGCAATCT CATCAGCGTT AA
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| Protein sequence | MQFAKGHGTQ NDFVLLPDLD ARLALTPAVV SALCDRRRGL GADGVLRVTT AKAALSAGVF
ERLPEGVGAG DWYMDYRNAD GSIAQMCGNG VRVFAHYLRA ADLESRDEFV VGSLAGPRPV
VLHGFDLAHR SRAEVTVEMG KVNLLGSGSA VVGGRRFTGL GIDVGNPHLA CVDTTLTEAE
LAALDVAAPV DFDPAQFPDG VNVEVLTALR DGAVSMRVHE RGVGETRSCG TGTVAAAVAA
LAQEGAAVGT LDVRIPGGVV TVSVTDTTSF LRGPSELVAT GELAGEWWQS HQR
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