| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1601 |
|---|
| Symbol | |
|---|
| ID | 4881510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1703768 |
|---|
| End bp | 1704853 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640138906 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001069889 |
|---|
| Protein GI | 126434198 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
|---|
| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCG CTGAGATTTC AGGGCTTCAC GAATTCGACG CCGAGCTCGA GGCTGCCAAC
CTACGTGGAC AATGGATCTA CGACGAAATG CTGGAGAGCG TCGTCGGCGG GCCCAAGCCT
GCGGGTGTTC CCTTTCTGTG GCGATGGCAG GACGTTCACG CGAAGCTTCT GAAGTCGTGC
GACGTGATGC CTGAAAGTTT GACGGCGCGA CGCAATCTCT CGTTCATCAA CCCGGATGCC
CGAGGAACCA CGCACACCAT CAACATGGGT ATGCAGATGC TCAAGCCCGG CGAGATTGCC
TATGCGCACC GCCACACCAT GGCGGCGCTC CGGTTCGCTA TTCAAGGCGG CCCCGGCCTG
GTGACTGTGG TGGATGGCGA GCCTTGTCAA ATGGATACCT ACGACCTGGT TCTGACCCCT
CGCTGGACGT GGCATGACCA TGAGAACGCC ACCTCGGAGA ACGTCGTTTG GCTCGACGTG
CTCGATATCG GCCTAGTGCT CGGGCTGAAT GTTCCCTTCT ATGAGCCCTA TGGCGAGAAG
CGCCAACCTC AACGCGAGGA CCCGGGGGAG CATCTCGCTG ACCGCGGTGG GATGCTGCGC
CCGGCGTGGG AGCAGGTCAA GGCGGCGAAC TTCCCGTACC GCTATCCTTG GCGTGACGTC
GAGCGGCAGC TCCAGCGGAT GGCGGGCCTT GCGGGCAGTC CCTACGACGG CGTAGTCCTG
CGTTATGCGA ACCCCGTTAC CGGCGGATCG ACTATGCCAA CGCTGGATTG CTGGGTGCAG
TTGCTGCGGC CGGGCCAGCA GACCGAGGCC CATCGCCACA CGTCGAGTGC CGTGTATTTC
GTCGTGCGCG GTGAGGGAAC TACGGTTGTC GACGGGGTCG AACTCGACTG GGGGCCCCAC
GACAGCTTCG TGGTGCCCAA CTGGAGCACC CATCACTTCG TCAACCGGTC GGCGGAAAAT
GCGTTGCTGT TCTCGGTCAA CGACATCCCT ACATTGAAGG CTCTCGATCT CTACTACGAA
GAGCCCGAGC TGTCTTTGGG GACGCAGCCA TTTCCGCCGG TCCCCGCTAA CCTCCGAGCC
CGCTGA
|
|---|
| Protein sequence | MSTAEISGLH EFDAELEAAN LRGQWIYDEM LESVVGGPKP AGVPFLWRWQ DVHAKLLKSC
DVMPESLTAR RNLSFINPDA RGTTHTINMG MQMLKPGEIA YAHRHTMAAL RFAIQGGPGL
VTVVDGEPCQ MDTYDLVLTP RWTWHDHENA TSENVVWLDV LDIGLVLGLN VPFYEPYGEK
RQPQREDPGE HLADRGGMLR PAWEQVKAAN FPYRYPWRDV ERQLQRMAGL AGSPYDGVVL
RYANPVTGGS TMPTLDCWVQ LLRPGQQTEA HRHTSSAVYF VVRGEGTTVV DGVELDWGPH
DSFVVPNWST HHFVNRSAEN ALLFSVNDIP TLKALDLYYE EPELSLGTQP FPPVPANLRA
R
|
|---|
| |