| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1376 |
|---|
| Symbol | |
|---|
| ID | 4877112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1470738 |
|---|
| End bp | 1471769 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640138684 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001069669 |
|---|
| Protein GI | 126433978 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.38327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGTG ACACCGGAGA GGTCCTGCAC GCGGTCGAAA GCTGCCTTGC GGCAGGTGAT
CATGTGCGCG CCGAGGAGAT CCTACGCACT GCGCTCGCGT CCGATCCGCA CCATCCACGG
CTGCTGACGG CGTACGCGCG CGCACAGTTC GGACAGTCGA ACTGGGCGGC GGCGGCGGCG
AGTGCGCACG CCGCACTGGC GGGCGATCCC CACAACGAGC ACGCGCTGCG GGTGTACACC
CGCGCACTCG AGATGCAGGG CCGACTCGAC GAGGCGCTGT GGACGGCGGG CCGGACGGTG
GCGATGCATC CGCTGAGCCA CCAGGCGCAC TACGGTCACG CGCGACTGCT CGAGGCGACA
GGCCGGACTG CCGAGGCGTT GACGGCCGTC AACGAGGCGC TGCGGCTGAA TCCGGCGGAT
ACCGACTCCC TGGTGCTCCG CGGGAACCTG TCCGTCGCCG TCAAGCAGTA CGGACCGGCC
GAAGCCGACT ATCGGGCGGC GTTGCGCCTG AACCCGGCAG ACGCCGAGGC CATCCACGGC
TTCGCGTTGC TCGACCACGC GCGCGGCAGG CGGTGGAGTG CGGTGCGCGG CTTTCTCCGG
GTGGAGGGGC TCGACGCGTC GTACCGGGAG GTGGTGCGGC AGAACGTCGG CGAGGTCCTC
GCCGGGCTGC TGCGTCGGTG GGCGTGGTTG GTGCTGATCG TGGGGTTCGC GGTGATCGTG
ACGTACACGA TGGACGAGGA CGGCGATCCC ACCGTCGTCC CGCGCATCGT CGCGGGCATC
GGCGCCGCAC TGTTGCTCGT CCCGATCGTC CGGATGGCGC GTGAGGTGCC GGGCCGGATG
CTGCGAAGTG TGTTGCGGGA GCGGCAGATG CTCGCCGTGC GGATCATGCA GTTGATCGCG
GGTGTCGTAT TCGGTGTGGC CACAGCACTT TTCGGGGCGA TGATGCCGAC AGCCGTGCTG
GCGTCAGTGC TGGTGCTCTC GCTGCCCGTG GTCGCGATCG TCGGGTACTT CACCGGCGAG
CGGCTGTGGT GA
|
|---|
| Protein sequence | MDGDTGEVLH AVESCLAAGD HVRAEEILRT ALASDPHHPR LLTAYARAQF GQSNWAAAAA
SAHAALAGDP HNEHALRVYT RALEMQGRLD EALWTAGRTV AMHPLSHQAH YGHARLLEAT
GRTAEALTAV NEALRLNPAD TDSLVLRGNL SVAVKQYGPA EADYRAALRL NPADAEAIHG
FALLDHARGR RWSAVRGFLR VEGLDASYRE VVRQNVGEVL AGLLRRWAWL VLIVGFAVIV
TYTMDEDGDP TVVPRIVAGI GAALLLVPIV RMAREVPGRM LRSVLRERQM LAVRIMQLIA
GVVFGVATAL FGAMMPTAVL ASVLVLSLPV VAIVGYFTGE RLW
|
|---|
| |