Gene Mjls_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0388 
Symbol 
ID4876134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp429290 
End bp430813 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID640137702 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001068692 
Protein GI126433001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.139893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAC TGTGGCTGGC CGGCCGTCCC GAACAGGCCG TTGCCCCCAA CCCGCTCGAC 
GAAACCACCC GCTCCGCCGA CGTTGTCGTG GTCGGCGCCG GGCTCACCGG TCTGGTCACC
GCCGTCCTGT TGGCCCGCGC CGGGCGCGAC GTGATGGTGC TCGAGGCGTT CCGTGCGGGC
GCGGGGGCGA CGGGTAACAC CACTGCCAAG ATCAGCCTGC TGCAGGGCAC GAAACTGTCG
AAGATCGTCG GCAAGCACGG CCCGGGCGTC GCGAAGAAGT ACGTCGAGGG CAACCTCGAG
GGCCAGGAGT GGCTGATCCA GCGGTGTGAG AACCACGGGA TCTCGGTGCA GCGCGAGGAC
GCCTTCACCT ATGCGCAGTC GGACACGGGG TTGCCCGCGG CGCGGGCGGA ACTGGAGGCG
TGTCAGGCGG CGGGTCTGGA CACGGAGTGG GTCGACGGGT CTCACGGGGC CCACGTGCCC
TTCCCGTTCG AGGGCGGTGT CCGGCTTGCC GGTCAGGCGC AGTTCGATCC GATGCCGTTG
TTGGACAGCC TGATCGTCGA ACTCGACGAG CGGGGCGGCC GACTGATCCA GGGCGTGCGG
GTGCAGCGGG TCTCCGGCAC CGACGGAGAT TCCAGGGGGC TCACGCTGCA CGTGCGCACC
TCGGGGGGTG ACGAGTTCGA CGTCGACACG CGGCAGTGCG TGCTGGCGAC GGGAATCCCG
ATCCTCGACC GCGGCGGGTT CTTCGCCCGT CTGAAACCGG CGCGGTCCTA CTGCATGGCG
TACAAGGTGC CCGGCACCAT CACCCGCGGC ATGTACCTGT CCACCGATTC CCCCACCCGG
TCGGTGCGTT ACGCGCCGAC CCAGGACGGG GATCGGCTGA TCGTCGGCGG GGCCGGACAT
CCGGTCGGCC GGGAGAAGCA TCCGTCGTCG TCGGTGCAGG AACTCGACGC GTGGGCCAAA
CAGCACTACC CGGGTGCGAT GCAGACGAAC TACTGGTCCG CACAGGACTA TTCACCGGCC
GACGAGCTGC CCTACGTCGG GCCGATCCTG CCCGGGCAGG ACAAGATCTA CGTGGCAACG
GGTTTCGACA AGTGGGGGAT GACCAACGGC GCCGCCGCCG CGCTGGCGTT GTCGAGCAGC
ATCCTGGGCG GCCGGATGGA CTGGGCCGAC GCGTTCGCCA GTTGGAGCCC GCACGAGCTG
TCGGGCATCC CGAAGGCGGT GCAGGCCAAC GTCGAGGTCG GGATCAACCT GGCCAAGGGA
TGGATCACGC CGGTGACGCG GATCGCCGAC CGGACCCCAC AGTCCGGCGG TGTGGTCAGC
GGACCGCCGT GGGCGCTGGA GGCGCGCAGC GTCGTCGACG GGGTGGAGCG CCGGGTCTCG
CCGGTGTGCC CGCACCTCGG CGGCATCGTC AACTGGAACG ACTCCGACGA ATCGTGGGAA
TGCCCGTTGC ACGGGTCGCG TTTCGCACCG GACGGGACCC TGCTCGAGGG CCCCGCGACG
CGGGATCTCA CGCGGTCTCT ATGA
 
Protein sequence
MTSLWLAGRP EQAVAPNPLD ETTRSADVVV VGAGLTGLVT AVLLARAGRD VMVLEAFRAG 
AGATGNTTAK ISLLQGTKLS KIVGKHGPGV AKKYVEGNLE GQEWLIQRCE NHGISVQRED
AFTYAQSDTG LPAARAELEA CQAAGLDTEW VDGSHGAHVP FPFEGGVRLA GQAQFDPMPL
LDSLIVELDE RGGRLIQGVR VQRVSGTDGD SRGLTLHVRT SGGDEFDVDT RQCVLATGIP
ILDRGGFFAR LKPARSYCMA YKVPGTITRG MYLSTDSPTR SVRYAPTQDG DRLIVGGAGH
PVGREKHPSS SVQELDAWAK QHYPGAMQTN YWSAQDYSPA DELPYVGPIL PGQDKIYVAT
GFDKWGMTNG AAAALALSSS ILGGRMDWAD AFASWSPHEL SGIPKAVQAN VEVGINLAKG
WITPVTRIAD RTPQSGGVVS GPPWALEARS VVDGVERRVS PVCPHLGGIV NWNDSDESWE
CPLHGSRFAP DGTLLEGPAT RDLTRSL