| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0099 |
|---|
| Symbol | |
|---|
| ID | 4875845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 106750 |
|---|
| End bp | 107523 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640137413 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001068403 |
|---|
| Protein GI | 126432712 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.338158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGACC TGTTCTCACT CGACGGCAAG GTCGCCGTGG TCACCGGGGG CGGCCGCGGG
ATCGGCGTGA TGATCGCCCG CGGGCTGTTG CAGGCGGGGG CGTCGGTCTA CCTGTCCAGC
CGCAAGGAGG CCGAACTCGC CGCGGCGGTG GACGAACTGT CGCCGCTGGG CCGGGTCGAG
GCCGTACCCG CCGATCTCGG GACCGCCGAG GGTGTGCAGA CGCTGTCCGA TGCGCTCGCC
GCCCGCGAGG ACCGGGTGCA CGCGCTGTTC AACAACGCCG GCGCGAACTG GGGTGCGCCC
TTCGCGGAGT TCCCCGAGTC CGGGTTCGAC CGCGTCTTCG ACGTCAACGT CAAGGGTGTC
TTCCTACTCA CCCGCGCCCT GGTGCCGTTG CTCGAAGCCG CTGCGACGGA ACAGGATCCG
GCCCGGGTGG TCAACACCGG CAGCGTCGAC GGCTTCCACA CGCCGGAGAA GGGCCGCAAC
AACTTCTCCT ACTCGGCGAG CAAGGCCGCC GTGCACATGC TGACCAAACA CCTGGCGACC
GAACTGGCGC CGAAGATCCT CGTCAACGCG ATCGCGCCCG GCCTGTTTCC GTCGCGGATG
ACCAAGGTGC TGCTCGCCGC CGGTGAGGAG GCCGTCGGCG CGGCGCTGCC GCTCGGCCGC
GTCGGTGCGC CCGACAACAT GGCCGGGATC GCGGTGTTCC TGGCCAGCCA TGCCAGCGCC
TACATCACCG GCGCGATCAT CCCCGTCGAC GGCGGCGTCA GCACGATCCG ATGA
|
|---|
| Protein sequence | MTDLFSLDGK VAVVTGGGRG IGVMIARGLL QAGASVYLSS RKEAELAAAV DELSPLGRVE
AVPADLGTAE GVQTLSDALA AREDRVHALF NNAGANWGAP FAEFPESGFD RVFDVNVKGV
FLLTRALVPL LEAAATEQDP ARVVNTGSVD GFHTPEKGRN NFSYSASKAA VHMLTKHLAT
ELAPKILVNA IAPGLFPSRM TKVLLAAGEE AVGAALPLGR VGAPDNMAGI AVFLASHASA
YITGAIIPVD GGVSTIR
|
|---|
| |