| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_4057 |
|---|
| Symbol | |
|---|
| ID | 4899726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3961526 |
|---|
| End bp | 3962281 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640137283 |
|---|
| Product | hydrophobic amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001068276 |
|---|
| Protein GI | 126452712 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAG AGGCGAAGCC GGTGTTGGCG GTACAGAATC TGTCGGTGCG CTACGGCAAG
GTCGAGGCGT TGCATCGTGC GGCCCTGACG GTCGGAGCAG GGCAGATCGT CACAGTGATT
GGGCCGAACG GGGCGGGAAA GTCGACGCTG CTCAATGCGG TGATGGGCGC GTTGCCGACG
AATGGCCATG CTGCCGGTAC GGTTCTTTAC CGCGGCGACG ATGTGGATGC ATTGCCGGTC
GAGCAGCGTG TCGCGCTCGG TATGTGCCTC GTGCCGGAAA AGCGTGAGCT ATTCGGCACG
ATGTCGGTAG AGGACAATTT GGTGTTAGGC GCATACCGGC GAAAGATGGC CGGCGACGCG
AGCTTCCTGG ATCAGCTCGA GCCGGTTTTT TCGCTGTTTC CGAGGTTGAA GGAGCGACGC
AAGCAAGCGG CCGGCACGCT TTCGGGTGGC GAGCGGCAGA TGCTGGCTGT CGGGCGCGCG
CTGATGGGCA AACCCGATTT GCTGATGCTC GACGAGCCGA GCCTTGGGCT TGCACCGCTG
ATCGTGAAGG AGATTTTCCA TATCATCAGC GCGCTGCGCG GGACCGGCGT TGCGACGCTG
TTGATCGAGC AGAACGCGCG GGCAGCATTG CAGATATCGG ATTACGGGTA TGTCCTCGAG
ACCGGTGAGA TTGCCCTGGA GGGGCCGGCG GGCGAACTCG CGCAGAATCC GCAAGTGATC
GAAACCTACC TGGGGCTCGC AAGAAAGGCG GTCTAG
|
|---|
| Protein sequence | MDREAKPVLA VQNLSVRYGK VEALHRAALT VGAGQIVTVI GPNGAGKSTL LNAVMGALPT
NGHAAGTVLY RGDDVDALPV EQRVALGMCL VPEKRELFGT MSVEDNLVLG AYRRKMAGDA
SFLDQLEPVF SLFPRLKERR KQAAGTLSGG ERQMLAVGRA LMGKPDLLML DEPSLGLAPL
IVKEIFHIIS ALRGTGVATL LIEQNARAAL QISDYGYVLE TGEIALEGPA GELAQNPQVI
ETYLGLARKA V
|
|---|
| |