| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3891 |
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| Symbol | |
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| ID | 4902713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3798020 |
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| End bp | 3801670 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640137117 |
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| Product | helicase, C-terminal:dead/deah box helicase, n-terminal |
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| Protein accession | YP_001068112 |
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| Protein GI | 126452359 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGCA ATGCCGTACT CAACATCGCC GGGCGGATCA GGGGGGATCT CGCCGGCTCG
GCGCTGTCGC CGCTGCAAGC GAAACTCTAC AGCCAGCGTG TCCGTCGGGA CATGGGCGCA
GATGGCCTGC CATCGTTCAG CCCAGCAGAA CTCACGGCAC GGCTCGACGA AGCGTGCTTA
TTGCTGGATG CGGCCTGGCT CGAGCGATCA GCCGACAACA GTCGCGCCTG GACGACTGCT
GTAAAGCGCG CCGCCGAAAT CCTCGAATGG GTTTCGCATG CCTCCCTTAA GCCTGCCGAC
GCTCCGATCC ATCTGCTGTC GGCGGCCGCT TATCAGGTGG CCGGTTATCC CGCTATGGCG
CTCGGCCATC TGCGCATGAT GCCGGCCGGC GAGGCTTTTT CCACGATTCT GCGCGAATTC
TTGCGTGGCG ATTTCGGTGC AGCACTGACT GCCGTGCAAA CGTTCTGGAA GGTGCATCAC
GACCTTGGCG AAGACCGTGT CTCGCGCCCC CCTCTTATCG ATGAGGGTGA GGAGCGCGAC
GAGAAGGATG ACGCCCGACT TGTCGATCTC GAACTCTCGA CCGTCCGGCA CGTCATCATG
TGCATCGGCA CCATCTGTTC CTATTTGCGC ACTGGCGAAG CCGCGTTGGT CGACCGTGCT
TTGGTCAAGC TCGATGCACT GGCGCAAAGC TATCTGCATA GCCGCGATCC CTACTCCTAT
CTGCTGGCGC GGCTCTGCGC CGGTGCAGCG CACCGTTTCA TAGACGCAAG CCTTTGGCCC
CACATCGAAC GGCTCGCCGA TGACGTGAGC TCACGCACCC GCGCCGCGCT AACGCAATTC
GCCCGCGCGG CCTTTGTCAA CCGCCGCGCC TTGGTATGGC CAGCGCAACG AGCCGGCATC
GATCGGCTAG CGGCCAACGA CAGCTTCGTT CTCTGCACGC CAACTGGATC GGGCAAGACA
ACCATTGCCA CCCTTGCCGC CGTTCAGGGC CTGTTCGTGG CGCCCCCCAA TCCGCTTCTC
GCAGAAAATC TTGTGCTTTA CCTTGTGCCG TCCCGGGCAC TAGCTGCCGA GGTCGAAGCC
CGGTTCACCG AAGACCTGCG TGACATCGCG GCGGAGCCCG TGGTTGTCAC CGGGCTTTAT
GGGGGCACCG ATTGGGGGCC GACCGATGCC TGGGTCCAGG TCGATCAGCC GACCGTCGTC
ATCTGTACCT TCGAAAAGGC CGATGCCTTG TTGCGCTATC TCGGAACGCT GTTTCTCGAT
CGCGTGCGCC TTGTCGTCAT TGATGAAGCG CATATGGTCG AGCAGGATCC GAACCGATCG
GACGCTGTCA CCGATGGCAC GTCTCGCGCT CTCCGACTCG AACAGCTCAG CGCCCGTCTG
CTCCGCGCGC AGGACAACAA GAACTTCCGG ATCATCGCGC TCTCGGCGGT AGCAGCCAAG
GCCGCGCCGG CAATTGCATC CTGGCTGTCG AGCGACGAAG ACGGCGGTCC GATCAGCTCG
ACCTATCGCA GCACCCGGCA GATGCTCGGT CGGCTCGAGG TCGCGCGAAG CGGCCGGTTC
GACATCCGCT ACGACTTAAT GGACGGCCGC ACGCTAGAGT TCGAGGATGA GCGCACCGAT
GATCGCCCCT ATATCCCCAG TCCTTTTCCA CCTGTCCCCG GCGGCGTTGA TAGCGCACTC
GGAGTCGAGA AATCGCTGCG TGGACCGACG CTCTGGGCGG CCCTCCATCT CGCCGCCGAG
CGATCAGACG GTACCCGGCC CACCGTGATG ATCTCGCTGA CGCAGAACGT CAGTTCCTTT
GCCGAGAATT GCGCCGATCT GCTCGAAGGC TGGATCGCCG CAGAAATCGC GCTTCCCAAT
TACTGGACCG TCGCCGACGG CGACCCGCAC TGGCAGAGCT GCCTCGCTGC GGCCGAGGAC
TATTTCACGA CGGCGTCCTT CGAATATCGC TTGCTGATGC ACGGAATCGC GGTCCATCAC
GGCCAGATGC CGGGGCTCTT GGCACGGCGA CTCAAGGTGG CGATCGATCG CGGTAATGTC
CGCGTGGTGA TCGCTACCTC GACACTCTCC GAGGGGGTCA ATATCCCCGT AAATACGCTG
CTAATCCCGA GCGTCCATCG CTCGAATACC GTTTTCTCGG TCAATGAATT CTCGAACCTC
ATCGGCCGTG CTGGGCGGCC GGGTGTCGCC ACCGAAGGCA ACGCCCTCGT CGTGCTACCT
GAGCGCGAAT ATCGTGGCCG CAGCCGCCAG TATGTCTGGA ACCGGACCTG GGAGGGTTAT
GACAAGCTTG TCGATGAGCT GAAGGAAGCG ACCGAACTTG CCTCCACTGG TGATCTGTCG
GTCGAGGAGG GTACCGCGAA TAGCGCGCTC GCCATCTTGC TGGAACGGCT ACGCGATGCG
TGGAAGGAGT TGAGCGGCAG CGATGATGAT GATGAATTTG CCGAATGGCT CGAGGAAACC
TCGGTTGTCA ATGGAGGGGG GGACGTCGAT GGCGACGACG ATGACGACAG TGAGAAACTG
CTGGATACGC TCGACGGATT GCTGATCGCC GCGATCCAAG AGACCGAACA GATGCGCCAC
GCGGGTCTCA GTGTTGCCGA TCTCGAAGCC GAATTGTCGG CCCTGTGGCG GCGAACCTAC
GCCTACGTCG CGGCGCACGA GGAAGATCGC CTAGCCCAGA CTTGGCTCCA GCGAGGGCGG
GCGATCACCA GCCTCTATCC CGACCCCAAT CGGCGCCGCC AGCTCTACAA GACCAGCCTA
CCGCCACGCT CCGGATCGAT CCTCCTCGAC CGCGTCGACG AGATCCGCGC GACCTTGGAG
GCCGGCATCG ACTATGCCGA TCGACCTGCA GAGCAACAAT TCCAGTTCAT CCGCGCGGTT
ATCGACCTGC TGAGCGAAGT GCCGGCGTTC CGCATCTCGA CCAAGCTCGG ACGGAAGAGT
AACTTCAAAG ACTGGGAGAA GTTGCTGCGC TGGTGGCTGT TTAAGACCAG CCTCAAAAAG
CAGCCCAAAC CGAAGGAACT TGGACCCTGG TTCTCCTTCG TCTCAGACAA TTTCATTTAT
CGTGGCAATT GGGGGTTGGG TAGCCTGATT GGCGTGCTGA TGGATCGGGG CGACGCCGCC
GGTCCGGTCG ATGCGCTCAC AATAGACGAC TGGCCACGCA GCGGCCTGCC GTGGATCGGT
TTCTGGCTCA AGGAACTGGT CAATTGGGGC ACGCTCGATC CGGTCGCCGC CTTCCTGCTG
GCGCGCGGCA ATGCTCGCAA CCGTGCGCAG GCCGAGGCGG ACGCGCAGGT TTATTATGCG
CAACTCGACG CGGACACCGC GCCAAATGAC AAGCTCGATC CTCGTCGTAT CCGGGATTGG
GTCGAAACAC GGCAGCCGCC GGCTCCGATG CGGCGGGCAT CGCGTGAGAT CGCACTCGAC
GTGCAGCTTG AGCGACCGGC GGGGGACTAT CTTGTGCGCC AGCTTAGCGT CCTGCCGCTC
GCAACACGCG ATCGCCTCCG CTGGATTGAT CCCGCCGGCT ATGCCGTCGC GCACTGCAAT
CGCCCGGCGG ATTGGGACGA TCAATCCTCG CGTTTCCGAT TCGAGCTTTC TGTAGACCTG
CGGCAGGTTA CCGGCGAACC CTATCTGCCG CACCGGCGCG AAACGCCTTA A
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| Protein sequence | MPSNAVLNIA GRIRGDLAGS ALSPLQAKLY SQRVRRDMGA DGLPSFSPAE LTARLDEACL
LLDAAWLERS ADNSRAWTTA VKRAAEILEW VSHASLKPAD APIHLLSAAA YQVAGYPAMA
LGHLRMMPAG EAFSTILREF LRGDFGAALT AVQTFWKVHH DLGEDRVSRP PLIDEGEERD
EKDDARLVDL ELSTVRHVIM CIGTICSYLR TGEAALVDRA LVKLDALAQS YLHSRDPYSY
LLARLCAGAA HRFIDASLWP HIERLADDVS SRTRAALTQF ARAAFVNRRA LVWPAQRAGI
DRLAANDSFV LCTPTGSGKT TIATLAAVQG LFVAPPNPLL AENLVLYLVP SRALAAEVEA
RFTEDLRDIA AEPVVVTGLY GGTDWGPTDA WVQVDQPTVV ICTFEKADAL LRYLGTLFLD
RVRLVVIDEA HMVEQDPNRS DAVTDGTSRA LRLEQLSARL LRAQDNKNFR IIALSAVAAK
AAPAIASWLS SDEDGGPISS TYRSTRQMLG RLEVARSGRF DIRYDLMDGR TLEFEDERTD
DRPYIPSPFP PVPGGVDSAL GVEKSLRGPT LWAALHLAAE RSDGTRPTVM ISLTQNVSSF
AENCADLLEG WIAAEIALPN YWTVADGDPH WQSCLAAAED YFTTASFEYR LLMHGIAVHH
GQMPGLLARR LKVAIDRGNV RVVIATSTLS EGVNIPVNTL LIPSVHRSNT VFSVNEFSNL
IGRAGRPGVA TEGNALVVLP EREYRGRSRQ YVWNRTWEGY DKLVDELKEA TELASTGDLS
VEEGTANSAL AILLERLRDA WKELSGSDDD DEFAEWLEET SVVNGGGDVD GDDDDDSEKL
LDTLDGLLIA AIQETEQMRH AGLSVADLEA ELSALWRRTY AYVAAHEEDR LAQTWLQRGR
AITSLYPDPN RRRQLYKTSL PPRSGSILLD RVDEIRATLE AGIDYADRPA EQQFQFIRAV
IDLLSEVPAF RISTKLGRKS NFKDWEKLLR WWLFKTSLKK QPKPKELGPW FSFVSDNFIY
RGNWGLGSLI GVLMDRGDAA GPVDALTIDD WPRSGLPWIG FWLKELVNWG TLDPVAAFLL
ARGNARNRAQ AEADAQVYYA QLDADTAPND KLDPRRIRDW VETRQPPAPM RRASREIALD
VQLERPAGDY LVRQLSVLPL ATRDRLRWID PAGYAVAHCN RPADWDDQSS RFRFELSVDL
RQVTGEPYLP HRRETP
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