| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3860 |
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| Symbol | |
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| ID | 4900304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3762259 |
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| End bp | 3763587 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640137086 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001068081 |
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| Protein GI | 126454719 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.320217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGCATA ACAAGCGCAT CTCTACGATA GGAGCTCGTT CGTTTCCCGA GATCCTTTCG
ATGAACTGCC CTGCCGATCT TCGCACCGGC CCGGCCGCCG GCCGACCGCG CACCGCTCCC
GCCCCGGCGC TCACGCCCGC GCTCACCATG TTCTTCTCGG CGACGGTCGG CGTGATCGTG
CTCAACCTGT TCGCCGCGCA GCCGCTGACG GGCCCGATCG CGGCCGAACT GCGGCTGCCC
GCCAGTCTGA CGGGGCTCGT CGCGATGCTG CCGCAGCTCG GCTACGCGGC GGGCCTCGTG
CTGCTCGTCC CGCTCGTCGA CCTGCTCGAA AACCGCCGGC TCATCGTGAC GACGCTCGCC
GTCTGTGCGG CGACGCTCGC GCTGCCCGCC GTCACGCGCT CCGGCGCCGT GTACCTCGCG
GCGGTGTTCG CCGCCGGGGC GGCGTCGAGC GTGATTCAGA TGCTGGTGCC GATGGCGGCG
TCGATGGCCC CCGACGAACG GCGCGGCCGC GCGGTCGGCA ACGTGATGAG CGGCCTGATG
CTCGGCATCC TGCTGTCGCG GCCGCTCGCG AGCCTGATCG CCGGCGCGGC CGGCTGGCGC
GCGTTCTATG GCGCGGCCGC GGCCGCCGAT ATCGCGATCG CCGCGGTGCT CGCCGCGAAG
CTGCCGCTGC GCGCGCCGCA GCTGTCGACC CGCTACGCGG CGCTGCTCCG CTCGCTCTGG
ACGCTCGTCG CGACCGAGCG CGTGCTGCAG CGGCGCGCGC TGTCCGCGGC GCTGTCGATG
GCCGCGTTCA GCGCGTTCTG GACCGCGATC GGCCTGCGTC TCGCCGCCGC GCCGTTCGAT
CTCGGCCTGC ACGGCATCGC GATGTTCGCG TTCGCCGGCG CCACCGGTGC GATCGTCACG
CCGTTCGCGG GCCTGGCCGG CGACCGCGGC CGGGAGCGCG ACGCGCTGCG CGGCGCGCAC
GTAGCGATGC TCGCCGCGTT GGCTGCGCTC GGCGTCGCGG GGGCCGGCTG GGGCGGATTC
GACGCGGCCG CGCATCCGGC GCTCGCGCTC GCGCTGCTCG TCGCCGGTGC GGCGGCGCTC
GACGCGGGCG TCGTCGCCGA TCAGACGCTC GGCCGGCGCG CGATCAATCT GCTCGATCCC
GCCATGCGCG GGCGGCTCAA CGGGCTCTTC GTCGGCCTGT TCTTCGTCGG CGGCTCGCTC
GGCGCCGTGC TCGCCGGCGC GGCATGGGCC TGGGCGGGCT GGGGCGCGGT GTGCGCGGTA
GGGCTCGTGT TTGCGGGCGC CGCGTTCGCG CTGGACTGGA TCGGCGCGCA CGGGCCGGCG
CCCCGCTGA
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| Protein sequence | MSHNKRISTI GARSFPEILS MNCPADLRTG PAAGRPRTAP APALTPALTM FFSATVGVIV
LNLFAAQPLT GPIAAELRLP ASLTGLVAML PQLGYAAGLV LLVPLVDLLE NRRLIVTTLA
VCAATLALPA VTRSGAVYLA AVFAAGAASS VIQMLVPMAA SMAPDERRGR AVGNVMSGLM
LGILLSRPLA SLIAGAAGWR AFYGAAAAAD IAIAAVLAAK LPLRAPQLST RYAALLRSLW
TLVATERVLQ RRALSAALSM AAFSAFWTAI GLRLAAAPFD LGLHGIAMFA FAGATGAIVT
PFAGLAGDRG RERDALRGAH VAMLAALAAL GVAGAGWGGF DAAAHPALAL ALLVAGAAAL
DAGVVADQTL GRRAINLLDP AMRGRLNGLF VGLFFVGGSL GAVLAGAAWA WAGWGAVCAV
GLVFAGAAFA LDWIGAHGPA PR
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