Gene BURPS1106A_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3582 
Symbolgph 
ID4899866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp3489526 
End bp3490263 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID640136808 
Productphosphoglycolate phosphatase 
Protein accessionYP_001067813 
Protein GI126454711 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACGA TGACGACGTC GCCTCTCAAT GGCGCGCCGC GCATCGAAGC GGCGCTCATC 
GATCTCGACG GCACGATGGT CGATACCGCA GACGATTTCA CGGCCGGCCT GAACGCGATG
CTCGCGCAGC TCGATGCCGA GGAGACGACG CGCGAGGAAG TGATGCGCTA TGTCGGCAAG
GGTTCGGAGA ACCTGATCCA GTGCGTGCTG ACGCCGCGCT TTTCCGCAGA CGACGCGAAC
GCGCGCTTCG ACGAGGCGCT CGCGCTCTAT CAGGCCGAAT ACGCGAAGAT CAACGGCCGC
CACACGCGGC TCTACCCGGA CGTCGACGCA GGCTTGCGGG CGATGCGTGA AGCGGGCGTC
AAGCTCGCAT GCGTGACGAA CAAGCCGTGC CGGTTCGCGG TCGAGCTGCT CGCGCAGTAC
GGCCTGTCCG GCCATTTCTC CGCGGTGTTC GGCGGCGACA GCGTGCCGCG CAAGAAGCCC
GATCCGGCGC CGATGCTCGC CGCATGCGCC GCGCTCGGCG TCGCGCCGCG CGCGGCGGTC
GCGATCGGCG ATTCGGAGAA CGACGCGCTC GCGGGCCGCG CGGCCGGGAT GGCGACGCTG
ACGGTGCCGT ACGGCTACAA CCACGGCAAC GCTATACAAA CGATCGAATC GGATGGTATA
GTCGATTCGC TTCTCGCCGC CGCACGGCTC ATCGCCGCGC ACAATTCGGC AGGATCAGCG
GCAAGATCAG CCATCTGA
 
Protein sequence
MSTMTTSPLN GAPRIEAALI DLDGTMVDTA DDFTAGLNAM LAQLDAEETT REEVMRYVGK 
GSENLIQCVL TPRFSADDAN ARFDEALALY QAEYAKINGR HTRLYPDVDA GLRAMREAGV
KLACVTNKPC RFAVELLAQY GLSGHFSAVF GGDSVPRKKP DPAPMLAACA ALGVAPRAAV
AIGDSENDAL AGRAAGMATL TVPYGYNHGN AIQTIESDGI VDSLLAAARL IAAHNSAGSA
ARSAI