| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2578 |
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| Symbol | |
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| ID | 4900936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2540285 |
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| End bp | 2541586 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640135805 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_001066832 |
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| Protein GI | 126455052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.909928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA GCATGCAGGA CAGCCTCGAC GAAGCCGCGC GGCCCGCGCG CGTCTCGTGG
CTCGCGGCGC TGCGCGGCCC GTTCGCTTAC CGCACGTTCG CGGCGATCTG GGTCGCGAGC
CTCGTCGGCA ATATCGGCGG ATCGATTCAG ACCGTCGCCG CGTCGTGGCT GATGACGTCG
ATGGCGCCGT CGCCGACGAT GGTCTCGCTC GTGCAGACGG CGTTCACCTT GCCGATCGCG
CTGTTCGCGC TGCTGTCGGG CGTCGCCGCC GACGCGTGGG ATCGCCGCAC GGTGATGCTG
CTGTCGCAGG CGCTGATGTT CTCGGTTGCG CTGTGTCTCG TCGCGCTCGC CGCCGCGGGC
GCGATGACGC CGGCGCGCCT GCTCGTCTGC ATGTTCGTCG GCGGCTGCGC GGGCGCGATG
TTCCAGCCCG CGTGGCAGTC CGCCGTGACC GAGCAGGTGC CCGCGCGCGA GCTGTCCGCG
GCGATCGCGC TCGACAGCTT CTCGATGAAC TTCGCGCGCA CCGCCGGGCC CGCGCTGGGC
GGCTTCATCG TCGCTTCCGT GTCGCCGAAC GCGGCGTTCG TTCTCAGCGG GCTGTCGTAC
GCGGGGCTCA TCTACGCGCT GTCGCGCTCG ATTCGCGGCG CGGCGGCGCG CCCGCCCGTG
CGCGAGCGCC TCGCGACGAT GCTCGTTCAA GGCGTTCGCT ATTGCGGCCG TGCGCGCGGC
ATTCGCGGCA CGTTGATCCG CAGCAGCCTG TTCGGGTTTC TCGGCAGTCC CGTCTGGGCG
CTGCTGCCGC TCTTCGCGAA AACGCAATTC GGCGGCGAGG CGCGCACCTA CGGCGTGCTG
CTCGCGTCGT TCGGCGCGGG CGCGGCGTCC GGCGCGCTGG GCGGCGCGGC GGGGCGCGCG
CGACTCGGCC GCGAGGCGCT CGTGCGGCTG TGCACGCTCA CGTTCGCCGC CGGCATGCTG
GCGACCGCGT GGAGCCCATG CCAGGCCGTC GCGATGCTGG GCCTCGCCGT CGCGGGCGGT
AGCTGGGTCG TGGTCGTCTC GACTTACAAC CTGACGATCC AGACGGCATC GCCGGCCTGG
GTGGCCGGGC GCTCGCTGTC GCTGTTTCAT TCGTTCATCG TCGGCGGGCT GTCGATCGGC
AGCTATCTCT GGGGCGTCGC CGCGCAGGGC AGCTCGATCA ACTCGGCGTT CGCGGTATCG
GCGCTGATGA TGGCGGCGTC GGCGTGTCTC GCGGCATGGC TGCCGCTGCC CACGCACGAG
GCGCTCGGCG AGCGGACGCA CGGCGAGCCG CGGCGGACAT GA
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| Protein sequence | MTDSMQDSLD EAARPARVSW LAALRGPFAY RTFAAIWVAS LVGNIGGSIQ TVAASWLMTS
MAPSPTMVSL VQTAFTLPIA LFALLSGVAA DAWDRRTVML LSQALMFSVA LCLVALAAAG
AMTPARLLVC MFVGGCAGAM FQPAWQSAVT EQVPARELSA AIALDSFSMN FARTAGPALG
GFIVASVSPN AAFVLSGLSY AGLIYALSRS IRGAAARPPV RERLATMLVQ GVRYCGRARG
IRGTLIRSSL FGFLGSPVWA LLPLFAKTQF GGEARTYGVL LASFGAGAAS GALGGAAGRA
RLGREALVRL CTLTFAAGML ATAWSPCQAV AMLGLAVAGG SWVVVVSTYN LTIQTASPAW
VAGRSLSLFH SFIVGGLSIG SYLWGVAAQG SSINSAFAVS ALMMAASACL AAWLPLPTHE
ALGERTHGEP RRT
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