| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2064 |
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| Symbol | |
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| ID | 4900201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 2060421 |
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| End bp | 2062166 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640135294 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001066329 |
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| Protein GI | 126454365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCGC GAATTGCCAG TGCATACTAC ATGGCCCCGC GCGGACGCGA GCCGATCGTG
CCGCTGCCGC CGGCCGCCTC GGGTGCTCCC GGACAGCGCG CGGAGCACGC CGCCGGGCTG
ATGACGCTGG AAAAGATGAT CGCGTTAGTG GGGGAGCGCG ATCCTCGCGT GCTCGTGAGC
GAGCTGTCGG CGCGCGCTGC ACACGAACGC GCGGCCAAGG CCTGGGCCGG CCACTATCCG
CAGCTGTCGG TCGAATACGC GCTGGGCAGG GAGGGCAACT GGAACGCGCA GGGCGGCCCC
ACGTCGCTTT CCAGTGTCAA CACCGACAAT TTCCATGGCG GCCAAGTCAA CCTCAGTTGG
GAGCTCTATG CCTGGGGGGC GACCCAAAAG CGCTATGAGG AAGCCTATGC GCTGGCGAAA
GCCGAAGAAG ACCGGTACCG GCGCGCGTGG GATCTGATCG TGATGGAAGC GATCAGCACC
TACGTCAACA TGTATCGCCT CAGGAAGCAG TTGGAGATCA CACGCCAGAC GCTGCTGGGA
CATTCGAAGC TGCTGAAGGT CGTGGAGGAT CGCGTCGGCG CGAAGCTTGC GCCGGAGTCG
CGCCGTAGCG ATGCGTTGCT GCGCGTGCAG GAAATCATGG CCGATCGTGA AGACATCCTC
AGTCAACTGA ACGAGGTCGA CACAACCTAT CGCACGCTGA CCGGCCTGGA GCCGCCGGCG
GATCTCGCCG AACCGCAGCT TGCAAAGGAG TATGAGGCTA AGCTGGCATG CCTGAGCTTC
GATGACAACC TTAAGCTTGC GTACTCGATT CATCCGCAGA TCCAAGCCAA TCTGCGAACC
ATCGAGGCTG CTGCCTACGC GGTCGAGGGC ATGAAGGCCG AGCGCCTGCC GAAGTTCAAT
CTCTATGCCC GATACAACAA CAACCGGTTG TTCTCGACGC AAGGAAGCAC GCTGCCCTTC
ACCGGCCGCG GCTATGAAAT CGGCGTGAAC GTGGTTTGGA CACTGTTCGG TTCGGCGTAC
GGCAACTCGA TCGCCGAGCG GATCTTCCTG AAAGAAAAGA GCGAGGCCGA CAACGAGCGC
GCGGTGCGCG AAGTCGAGCG AAACATCCAT ATTGCACGTG ATGCGCTGGC TGCCGCCAAG
GGCCGCACGG CAATTCTTGA TGAGACGCTG CGCCTGTCCG ACGAAGTGTT GAATCAACGG
CAGCATTCGT TCTCGGTTCA AGCCATGTCC GACGAAGCGG TCAACGGTCT TTCCAATGCC
TACTATTCGC GCGCGCGCGC AGCGACGGCA TTGCTCAACC TGCATATGCG CGAGGTGGTG
GCCAGCTACA CGCTTGTCGA GAGCTCGGGG CTGATGAACG AGGTGTTCCC GGCGCCACTC
TCGGTACGCG GCCCGATCGG GCCGGCACCG GTCCGCAATT TCTTCCCGGG TAGGGTGGCC
AGCATGAACC CGGCGGATGG CATGCCGCTG GAACGTAACG TCATGCCGGA TCTGCTGACG
CGCAAGGTTG TGCTGACGGA CGGTATGTCA ACGACCGCCG AACCGCAATC GGGCACGGCG
CCGGCGCCGG CGTCGTCGGC AGGTGGCGCG CCGGCTTCGG CATTCGATGC GGCCACGGCC
CGGTCGCTCG AGGTGCCGCC CGTGATGCTC CCGCCGGCCC GGGAGGCGCC GCTTGACAAC
GGGTCACCGC AGCCCCCCGC GGGCGACGCG CAAGCACCGG CAGCCGCGAC GGGAACCACT
CCGTAG
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| Protein sequence | MQARIASAYY MAPRGREPIV PLPPAASGAP GQRAEHAAGL MTLEKMIALV GERDPRVLVS
ELSARAAHER AAKAWAGHYP QLSVEYALGR EGNWNAQGGP TSLSSVNTDN FHGGQVNLSW
ELYAWGATQK RYEEAYALAK AEEDRYRRAW DLIVMEAIST YVNMYRLRKQ LEITRQTLLG
HSKLLKVVED RVGAKLAPES RRSDALLRVQ EIMADREDIL SQLNEVDTTY RTLTGLEPPA
DLAEPQLAKE YEAKLACLSF DDNLKLAYSI HPQIQANLRT IEAAAYAVEG MKAERLPKFN
LYARYNNNRL FSTQGSTLPF TGRGYEIGVN VVWTLFGSAY GNSIAERIFL KEKSEADNER
AVREVERNIH IARDALAAAK GRTAILDETL RLSDEVLNQR QHSFSVQAMS DEAVNGLSNA
YYSRARAATA LLNLHMREVV ASYTLVESSG LMNEVFPAPL SVRGPIGPAP VRNFFPGRVA
SMNPADGMPL ERNVMPDLLT RKVVLTDGMS TTAEPQSGTA PAPASSAGGA PASAFDAATA
RSLEVPPVML PPAREAPLDN GSPQPPAGDA QAPAAATGTT P
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