Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2034 |
Symbol | |
ID | 4900881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2017921 |
End bp | 2018562 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640135264 |
Product | putative transmembrane protein DUF1109 |
Protein accession | YP_001066299 |
Protein GI | 126453352 |
COG category | [S] Function unknown |
COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.619764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGA ACGATTTCAT CGACATGCTG GCGGCGGGCG TCACACCCGT CGAGCGCGGC GTCCCGGCCA GGCGCCTGGG CAGTGCGCTT GCCGTCGCTG CGGTGGGCGC CGTGCTGCTG ATGACGATTG CGTTCGGCGT GCGCCCCGAT CTGTCGGCCG TGATGCGCAC GCCGATCTTC TGGGCGAAGC TCGCGTTTCC GATTTGCGTG GCGGCAGGCG CGATCATGGC GACCGTACGG CTCGCCCGCC CCGGCGCGAC CGTCGGTGCG GGCCGGCTGG TGGTCGGCGT CGGCATCGCG GCGGTCTGGA TCGCGGGCCT TTATGCGGTC GCGACGGCCG CATTCGGCGA CCGGCTCGCG GTCGTGCTCG GTCAGACGTG GCGCGTGTGT CCGTTCAACA TCGTTCTGCT GTCGGCGCCC GGTTTCGTTG CGATGTTCGT CGCAATCCGG GGGTTGGCGC CCACGCGGTT GCGTACCGCG GGCGCGGCGG CGGGGCTCGC CGCGAGTGCG ATCGCGACGA TCGCCTACTG CTTCCACTGC CCGGAAATGA GCCCGGCATT CTGGGGCGTC TGGTATCTGC TCGGGATGGC GTTGCCGGCC GCACTCGGCG CACTCGTCGC TCCGATCTGG CTGCGCTGGT GA
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Protein sequence | MKTNDFIDML AAGVTPVERG VPARRLGSAL AVAAVGAVLL MTIAFGVRPD LSAVMRTPIF WAKLAFPICV AAGAIMATVR LARPGATVGA GRLVVGVGIA AVWIAGLYAV ATAAFGDRLA VVLGQTWRVC PFNIVLLSAP GFVAMFVAIR GLAPTRLRTA GAAAGLAASA IATIAYCFHC PEMSPAFWGV WYLLGMALPA ALGALVAPIW LRW
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