Gene BURPS1106A_2033 details

Gene Information

• Locus tag: BURPS1106A_2033
• ID: 4899547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 2017261
• End bp: 2017902
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640135263
• Product: putative transmembrane protein DUF1109
• Protein accession: YP_001066298
• Protein GI: 126452190
• COG category: [S] Function unknown
• COG ID: [COG4944] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACCC GAGACTTGGT CACCTGGCTG GCAACCGATC TGACGCCGGT TGACCCCGGC 
GCAGTTTTGC AGCGGCTCTA CCACGCGCTC CTCGTCGGCT TCGCCGGCAG CACCGCCCTC 
CTCGTCGCGT TGTATGGCAT CCGCAGCGAT ATGCCCCAAT TGACCCTGAC GACGATGTTC 
TGGGTGCGGT TCGCGTTCCC ACTCGCCGTC GTCTTCTCGG CAACGCGGCT CGCCGAGCGC 
CTTGGCCGCC CTGGCGCGCG ACTGTGTTCC GTTGGGCTTG CGACCGCGCT GCCGGTTGCC 
GCGATGCTGC TTGCCACGGG CGGCGTATTG ATTGCGACTC CGCCCGGCTA CCGGCTGCAA 
CTGGTGCTCG GAACGACGTG GCGGACCACG GTCGTGGACA TCGTGCTGCT GTCGCTGCCG 
CCGCTCGCCG CCGCGTTGCA TGCGATGAAG CAACTCGCGC CAACGCGTCT CGTGCTCGCC 
GGCGCGGGTG CCGGCCTTCT TGCCGGCGCA CAGGCGCTCG TCGTCTATTC GCTCTACTGC 
GCCGAGATGT CGATGCCGTT CTGGGGTGTC TGGTACATGT TGTCGCTCAT GCTAACGGTG 
GCTCTCGGTG CGATGCTTGC CCCGATCTGG CTGCGCTGGT AG 

 

Protein sequence

METRDLVTWL ATDLTPVDPG AVLQRLYHAL LVGFAGSTAL LVALYGIRSD MPQLTLTTMF 
WVRFAFPLAV VFSATRLAER LGRPGARLCS VGLATALPVA AMLLATGGVL IATPPGYRLQ 
LVLGTTWRTT VVDIVLLSLP PLAAALHAMK QLAPTRLVLA GAGAGLLAGA QALVVYSLYC 
AEMSMPFWGV WYMLSLMLTV ALGAMLAPIW LRW