| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1266 |
|---|
| Symbol | |
|---|
| ID | 4902485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 1241290 |
|---|
| End bp | 1242579 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640134496 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001065545 |
|---|
| Protein GI | 126454498 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.111306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCG TGGACGGCGC GGATGCGGCA CGCGCCGACG CCCGTCGCGA CGTCGCGGCG
GTTGCGCTCG GCAACGCGAT CGAATTCTTC GACTTCGGCG CCTATGCGAC CTTCGCGGTG
ATGATCGGCC GCACGTTCTT CCCGACGCAG CGCCCGTTCG TGAGCCTGCT GCTGTCGGTA
TCCGTGTTCG GGCTCGGCTT CGTCGTGCGG CCGCTCGGCG CGCTCGTGAT CGGCGCGTAC
GCGGACCGCG CGGGACGCAA GCCCGCGATG ACGCTGACGC TCGCGATGAT GGCGGTCGGC
ACGGGCGCGA TCGCCGTGCT GCCGGGATAC GAGACGATCG GCGTCGCGGC GCCGATCCTG
CTCGTCGTCA CGCGGCTGAT CCAGGGGCTC GCGTGGGGCG GCGAGGCGGG GCCCGCGACG
ACCTACATTC TCGAGGCCGC GCCGCCCGAG CGGCGCGCCG CGTACGCGTG CTGGCAGGTC
GCGACGCAAG GTTTCGCGGC GGTCGCGGCG GGGCTCGCGG GTTACGCGCT GACGCTCGCG
CTGCCCGAGG CCGAGCTGGA TGCGTGGGGC TGGCGCGTGC CGTTCGCGCT CGGCCTGCTG
GTGCTGCCGG TCGGCGTCTA CATTCGCCGG CGGTTATCCG ACACGATCGA CCCGCGCCAC
GCATATTGCA CGACGCGCGA GGTCCTGCGC GAGCTGAACG CTCGGCACCG GCGGCCGATC
GCGATCGGCC TGATGATCCT GCTCGGCAGC ACGATCACGC AGTACTTCCT CAACTACATG
ACGACGTTTG CATTGACCGA GCTGCATTTG CCGGGGGGCG TCGCGATGCT CGCCACGTTC
GTGACAGGCG CGGCGCTCGC GGTGGGCGCG CTCGCGGGCG GCAGCCTGTC GGATCGCGTC
GGACGCCGCG CGATCCTGAT CTGGCCGCGC GTGCTGCTGT TGCTGCTGCT CTTTCCAGCG
TTGCAACTGA TCGTGTCGCG TCCGACGCCC GCCGTGTTCC TCGCCACGCT GACCGTGCTG
TCCGGCCTGC ACGGCATGAG CGGCGCGGCG CTCATCGTGC TGATCGCCGA GAGCTTTCCG
CAGCGCGTGC GCTCGACGGG ATTCTCGATC GTCTACGCCG TCGCGGTGTC GTTGTTCGGC
GGCACCGCAC AGAGCATCGT CACCTGGCTC ATCGGCACCA CCGGCAACCC GATGGCGCCG
AGCGGCTATC TGCTTGTCGC GAACGCGATC TGCATCGCGG CGGGATGGCT TGCCGCCGAG
ACCCGGCCGG GCGGGCGCGG CACGCGCTAG
|
|---|
| Protein sequence | MAGVDGADAA RADARRDVAA VALGNAIEFF DFGAYATFAV MIGRTFFPTQ RPFVSLLLSV
SVFGLGFVVR PLGALVIGAY ADRAGRKPAM TLTLAMMAVG TGAIAVLPGY ETIGVAAPIL
LVVTRLIQGL AWGGEAGPAT TYILEAAPPE RRAAYACWQV ATQGFAAVAA GLAGYALTLA
LPEAELDAWG WRVPFALGLL VLPVGVYIRR RLSDTIDPRH AYCTTREVLR ELNARHRRPI
AIGLMILLGS TITQYFLNYM TTFALTELHL PGGVAMLATF VTGAALAVGA LAGGSLSDRV
GRRAILIWPR VLLLLLLFPA LQLIVSRPTP AVFLATLTVL SGLHGMSGAA LIVLIAESFP
QRVRSTGFSI VYAVAVSLFG GTAQSIVTWL IGTTGNPMAP SGYLLVANAI CIAAGWLAAE
TRPGGRGTR
|
|---|
| |