| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2885 |
|---|
| Symbol | |
|---|
| ID | 4888107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 2738772 |
|---|
| End bp | 2740388 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640132821 |
|---|
| Product | tryptophan halogenase PrnA |
|---|
| Protein accession | YP_001063877 |
|---|
| Protein GI | 126444889 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC CGATCCAGAA TATCGTCATC GTGGGCGGCG GCACCGCGGG CTGGATGGCC
GCCTCGTACC TTGTCCGGGC GCTCCAACAG CAGGCGAACA TTACGCTCAT CGAGTCCGCG
GCGATCCCCC GGATCGGCGT GGGCGAGGCG ACCATCCCGA GTTTGCAGAA GGTGTTCTTC
GACTTCCTCG GGATTCCGGA GCGGGAGTGG ATGCCCCAGG TGAACGGCGC GTTCAAGGCC
GCCATCAAGT TCGTGAACTG GAGGAAGTCT CCCGACCGCT CGCGCGACGA TTACTTCTAC
CATTTGTTCG GCAGCGTGCC GAACTGCGAC GGCGTGCCGC TTACCCACTA CTGGCTGCGC
AAGCGCGAAC AGGGCTTCCG GCAACCGATG GAGTACGCCT GCTACCCGCA GCCCGAGGCG
CTCGACGGCA AGCTTGCACC GTGCCTGCCC GACGGCACCC GCCAGATGTC CCACGCGTGG
CACTTCGACG CGCACCTGGT GGCCGACTTC CTGAAGCGCT GGGCCATCGA ACGCGGGGTG
AACCGCGTGG TCGACGAGGT CGTGCAGGTT CACCTGAACG AGCGCGGCCA CATCTCCAGC
CTGTCCACCC AGGAGGGGCG AACGCTGGAG GCGGACCTGT TCATCGACTG CTCCGGCATG
CGAGGGCTCT TGATCAACCA GGCCCTGAAG GAGCCCTTCA TTGACATGTC CGACTACCTG
CTGTGCGACA GCGCGGTCGC GAGCGCCGTG CCCAACGACG ACGCGCGCGT GGGGGTCGAG
CCGTACACCT CCGCGATCGC CATGAACTCG GGATGGACCT GGAAGATTCC GATGCTGGGC
CGGTTCGGCA GCGGCTACGT CTTCTCGAGC AAGTTCACCT CGCGCGACGA GGCCACCGCC
GACTTCCTCA ATCTCTGGGG TCTCTCGGAC AAGCAGCCGC TCAACCAGAT CAGGTTCCGG
GTCGGGCGCA ACAGGCGGGC GTGGGTCAAC AACTGCGTCG CCATCGGGCT GTCGTCGTGC
TTTTTGGAGC CGCTGGAATC GACGGGAATC TATTTCATCT ACGCGGCGCT TTACCAGCTC
GTGAAGCACT TCCCCGACAC CTCGTTCGAT CCTCGGTTGA CCGACGCGTT CAACGCCGAG
ATCGTCTACA TGTTCGACGA CTGCCGAGAT TTCGTCCAGG CGCACTATTT CACCACGTCG
CGCGAAGACA CACCGTTCTG GCGCGCGAAC CGGCACGACC TGCGGCTCTC GGACGCCATC
AAAGAGAAGG TTCAGCGCTA CAAGGCGGGG CTGCCGCTGA CCACCACGTC GTTCGACGAT
TCCACGTACT ACGAGACGTT CGACTACGAA TTCAAGAACT TCTGGTTGAA CGGAAACTAC
TACTGCATCT TTGCCGGCTT GGGGCTACTG CCCGACCGAT CGCTGCCGCT CTTGCGGCAC
CGATCGGAGT CGATCGATAA GGCCGAGACG ATGTTCGCCC GCATCCGGCG CGAGGCAGAG
CGCCTGCGAA CGAGCCTGCC GACGAACTAC GACTACCTGC GCTCGCTGCG TGAGGGCGAC
GTGGGGCTGT CTCGCAGCCG GCCCGGGCCG ACGCTCGCGG CACCGGAAAT CCTGTAG
|
|---|
| Protein sequence | MSNPIQNIVI VGGGTAGWMA ASYLVRALQQ QANITLIESA AIPRIGVGEA TIPSLQKVFF
DFLGIPEREW MPQVNGAFKA AIKFVNWRKS PDRSRDDYFY HLFGSVPNCD GVPLTHYWLR
KREQGFRQPM EYACYPQPEA LDGKLAPCLP DGTRQMSHAW HFDAHLVADF LKRWAIERGV
NRVVDEVVQV HLNERGHISS LSTQEGRTLE ADLFIDCSGM RGLLINQALK EPFIDMSDYL
LCDSAVASAV PNDDARVGVE PYTSAIAMNS GWTWKIPMLG RFGSGYVFSS KFTSRDEATA
DFLNLWGLSD KQPLNQIRFR VGRNRRAWVN NCVAIGLSSC FLEPLESTGI YFIYAALYQL
VKHFPDTSFD PRLTDAFNAE IVYMFDDCRD FVQAHYFTTS REDTPFWRAN RHDLRLSDAI
KEKVQRYKAG LPLTTTSFDD STYYETFDYE FKNFWLNGNY YCIFAGLGLL PDRSLPLLRH
RSESIDKAET MFARIRREAE RLRTSLPTNY DYLRSLREGD VGLSRSRPGP TLAAPEIL
|
|---|
| |