| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2175 |
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| Symbol | |
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| ID | 4888442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | - |
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| Start bp | 2112396 |
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| End bp | 2114249 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640132112 |
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| Product | YscC/HrcC family type III secretion outer membrane protein |
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| Protein accession | YP_001063169 |
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| Protein GI | 126442335 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTATG CCGACACGGC CAGACGATAC GCAGCCGCGC TTGCCGCGTC GCTGCTGATG
ACGGGCGCGG CGTTCGCCGC GCCGACCGAC GCGGCGCCGC TCGCCGACGC GCCCGCGGCG
GCGAGCGCGA CGCCCGACGC GCGGGACGGC GACGCGTCGC GCGTGGCCGC GCCGCAGGAC
GACGAGCGCC ACTTCGTCGC GAACGACGCG AGCATCAGCG TGCTGCTCAA TGCGCTGTCG
GGCCGGCTGC ACAAGCCGAT CGTCGCGAGC GAGAAGGTGC GCCGCAAGCA CGTGACGGGC
GAGTTCGACC TCGCGCAGCC CCGCGCGCTG CTCGCGCGGC TCGGCGAATC GATGTCGCTG
CTCTGGTACG ACGACGGCGC GTCGATCTAC ATCTACGACA ACTCGGAGAT CAAGAACGCG
GTCGTCTCGA TGCGCCATGC GACGGTGCGC AACCTGCGCG ATTTCATCCG GCAGACGCGG
CTCTACGATC CGCGCTTTCC GGTGCGCGGC GACGACCTGA GCAACACGTT CTACGTGACG
GGCGCGCCCG TCTACGTGAA TCTCGTCGCC GCCGCCGCGC GCTATCTCGA CGAGGTGCGC
TCGAACGAGG CGAGCGACCG GCAGGTCGTG CGCGTCGTGC AGCTTCACAA CAGCTTCGTC
GTCGACCGCC AGTACACGCT GCGCGACAAG GCAGTCGACA TCCCAGGCAT GGCGACCGTG
CTCGGCCGCA TCTTCGGCCC GGCGCGGCCG GACGCGCCGG CGGACTCGCC CGTCGCGGCG
GCCGACGCCA CGGCGCGCGG CGGCGCGGCG GGCAAGCCGG CGTTCTCGCT TGCCGATGCG
TTGCCCGCGC CGCTCGACGC CGGCAACGCG CCGGGCGGCG CGGGCTCGAC GCATTCGACA
AACCCGGCGA ACGCCGCGAG CCCGATGGGC GGCGCGGCGG GCGGCGTCGC GCTGCCCGCG
TCGGACGGCG TGCGCGCGGT GGCGTATCCG GACACGAACA GCGTGATCCT CGTCGGCCGG
CTCGACAAGG TGCAGGACAT GGAGGCGCTG ATCCGCTCGC TCGATGTCGA GAAGCGGCAG
ATCGAGCTGT CGCTGTGGAT CATCGACATC CGCAAGAGCC GGCTCGATCA GCTCGGCATC
GACTGGCAGG GCGCGCTCAA TGCGCCGGGC ATCGGCGTCG GCTTCAACAA TCGCGGCGGC
AACGTGACGA CGCTCGACGG CACCAGGTTC CTCGCATCGG TCGCGGCGCT CAGCCAGACG
GGCGACGCCA CCGTGATCTC GCGGCCGATC GTGCTCACGC AGGAGAACGT GCCGGCGACG
TTCGACAGCA ACCAGACGTT CTACGCGAAG CTGATCGGCG AGCGCACGGT GCAGCTCGAT
CACGTGACCT ACGGCACGCT CGTCAACGTG CTGCCGCGGC TCACGCGCGA TGGGTCGCAG
GTCGAGATGA TCGTCGACAT CGAGGACGGC AACACCGACG GCGCGACGAG CGACGGCCAG
ATCGTCATCG ACAACAACAC GATGCCGCTC GTGAACCGCA CCGAGATCAA CACGGTCGCG
CGCGTGCCGC ACGAGATGAG CCTGCTCATC GGCGGCAACA CGCGCGACGA CGTCACGCGC
CGCACGTTCC GGATTCCCGG GCTGGCCAGC ATTCCGCTGA TCGGCGGGCT GTTTCGCGGG
CATTCGGATC GGCACGAGCA GGTGGTGCGC GTGTTCCTGA TCCAGCCGAA GCTGCTGCGC
GCGGGCGCGG CCTGGCCCGA CGGCCAGCCG TGGGAATCGG GCGATCCGGC GGACAACGCG
ACGCTGCGCG CGACCGTGCA GATGCTCAAA CCCTACATGG ACGACAAGTC ATGA
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| Protein sequence | MMYADTARRY AAALAASLLM TGAAFAAPTD AAPLADAPAA ASATPDARDG DASRVAAPQD
DERHFVANDA SISVLLNALS GRLHKPIVAS EKVRRKHVTG EFDLAQPRAL LARLGESMSL
LWYDDGASIY IYDNSEIKNA VVSMRHATVR NLRDFIRQTR LYDPRFPVRG DDLSNTFYVT
GAPVYVNLVA AAARYLDEVR SNEASDRQVV RVVQLHNSFV VDRQYTLRDK AVDIPGMATV
LGRIFGPARP DAPADSPVAA ADATARGGAA GKPAFSLADA LPAPLDAGNA PGGAGSTHST
NPANAASPMG GAAGGVALPA SDGVRAVAYP DTNSVILVGR LDKVQDMEAL IRSLDVEKRQ
IELSLWIIDI RKSRLDQLGI DWQGALNAPG IGVGFNNRGG NVTTLDGTRF LASVAALSQT
GDATVISRPI VLTQENVPAT FDSNQTFYAK LIGERTVQLD HVTYGTLVNV LPRLTRDGSQ
VEMIVDIEDG NTDGATSDGQ IVIDNNTMPL VNRTEINTVA RVPHEMSLLI GGNTRDDVTR
RTFRIPGLAS IPLIGGLFRG HSDRHEQVVR VFLIQPKLLR AGAAWPDGQP WESGDPADNA
TLRATVQMLK PYMDDKS
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