| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1890 |
|---|
| Symbol | |
|---|
| ID | 4887905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1843316 |
|---|
| End bp | 1844938 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640131828 |
|---|
| Product | di-haem cytochrome c peroxidase |
|---|
| Protein accession | YP_001062885 |
|---|
| Protein GI | 126443375 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCG GCAAGCGAAG CGGCGCGGCG CGGCGCGCGG GGGCGGCGTT CGCCGCGCGC
GGGGCCGCCC TCGCGGGCGC GCCCGGCGCG AGGAATGCAC GCCGCATCGT TTCGACCCTC
GCCATCGCGG CCGTCACGCG GGCGGCCGGC GGCGCGCTCG CCGCGTGCGC ATCGGCGATC
GCCTTCGCGT CCGGCGCCGC CGCGCCGGGC GCGCTCGACG CAGTGCGCGC GGCACACCCG
GCGAGTTCGC TGAGCCCGGC GCGCACGCCG GGCGCCGGCG GCGCGGCTCA TGTGAAGCCC
GTGCAGGAGG CGCTCCGGGC AAAGGCCGCC TCGCCTTCGC CCTCGCTTTT GCCTTCCCCC
CCGTCGCCGA CGACGTCCCT GCTTCCCGGC GCGCCGCCGC AGCGCGTCGT CGCCACGATC
GGCCGAGGCA CGCCGCAGGT CGCGTCGAAA GTCGACCCGA CCGCGGCCGC GTTCCATCCG
GACCCGGCGC TCGCCGCCCT CGGCAAGCGC GTGTTCTTCG ATCCGGCGTT ATCGGAGCCG
CGCGGCACGT CGTGCGCGAG CTGCCACGAT CCGGGCCGCG CATTCGCGCC GACGCTCTCG
CGCGCGGCGC TCGCCGGCCC GCGCGTGCCG CAGGGCAGCC GCCCCGGGCA TTTCAGCCGC
CGCAACGCGC CGTCGCTGCT GTACGTGCGC TACGTGCCGC GCCGCCATTT CTATCAGGAC
GACGACGCGC TCGCCCCCGC CCCGTTCGGC GGCTTGTTCT CGGACGGCCG CGCCGACACG
CTCGCCGAGC AGTTGCGCGG CCCGCTCTTC GATCCGGACG AGATGAACAA CGCGTCGCCC
GCGGCGCTCA CCCGCAAGAT CGGCGGCACC GCACTCGGCG CGGCGCTCGC CGAACGCTTC
GGCCCGTCGG TGCGCCGCGA TCCCGAACGC ATGGTGCGCG CGCTCGGCGA AGCGATGCAG
GCGTACCTGC AAAGCGACGA GATGGCGCCG TTCTCGTCGC GCTACGACGC GTACGTGATG
CAACGCGCGC CGCTCACGCC GCAGGAGAAG CGCGGGCTCG CGCTCTTCAG GAATCCGGAC
AAAGGCAACT GCATGAGTTG CCACACGCTG TCGGACACCG CGAGCCGGCC CGAGCGCTCG
CTCTTCACCG ACTTCGGCTA CGACGCGATC GCGGTGCCGC GCAATCGCGC GCTGCGTGCG
AACCGCGACC CGCGCCACTT CGACAACGGC CTGTGCGACA CCGCCGCGAA GCTGCGCTGG
CCCGAGCCGG CGCAATGGTG CGGCTATCTG CGCACGCCCG GCCTGCGCAA CGTCGCGATC
AAGGAGTCGT TCATGCACAA CGGCGTGTTC GACACGCTGC GCGATGCGGT GGCGTTCTAC
AACACGCGCT CGACGGATCC GAAGCGCTGG TATCACGGCC GCGATACGTT CGACGACGTG
CCGGCCGCGT ACCGCAGCAA CATCAACGTG AACTCGACGC CGATGAACCG CCGAGCCGGC
ACGCCACCCG CGATGACGGA CGCCGACGTC GACGACATCG TCGCGTTCCT GCGCACGCTG
ACGGACGCCC GCTACGTCGG GCTGATGCCC GCGGCGCCCG ACGGCAAGGC GGCGCGACCG
TGA
|
|---|
| Protein sequence | MTGGKRSGAA RRAGAAFAAR GAALAGAPGA RNARRIVSTL AIAAVTRAAG GALAACASAI
AFASGAAAPG ALDAVRAAHP ASSLSPARTP GAGGAAHVKP VQEALRAKAA SPSPSLLPSP
PSPTTSLLPG APPQRVVATI GRGTPQVASK VDPTAAAFHP DPALAALGKR VFFDPALSEP
RGTSCASCHD PGRAFAPTLS RAALAGPRVP QGSRPGHFSR RNAPSLLYVR YVPRRHFYQD
DDALAPAPFG GLFSDGRADT LAEQLRGPLF DPDEMNNASP AALTRKIGGT ALGAALAERF
GPSVRRDPER MVRALGEAMQ AYLQSDEMAP FSSRYDAYVM QRAPLTPQEK RGLALFRNPD
KGNCMSCHTL SDTASRPERS LFTDFGYDAI AVPRNRALRA NRDPRHFDNG LCDTAAKLRW
PEPAQWCGYL RTPGLRNVAI KESFMHNGVF DTLRDAVAFY NTRSTDPKRW YHGRDTFDDV
PAAYRSNINV NSTPMNRRAG TPPAMTDADV DDIVAFLRTL TDARYVGLMP AAPDGKAARP
|
|---|
| |