Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0294 |
Symbol | |
ID | 4888022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 260994 |
End bp | 262307 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640130235 |
Product | major facilitator superfamily permease |
Protein accession | YP_001061300 |
Protein GI | 126443821 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.681741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGT CCGCTCTCAA TTTCGCCGGC GCGCCGGCCG ACGCGCGCGC CGCCGCAAAG AAACGCCGCC TGATCGCCGC GGCCGCCGTC GGCAACGCGC TCGAGTTCTA CGATTTCACC GTCTACAGCT TCTTCGCGAT CCTGATCGGC AAGCTGTTCT TCCCGGTTCA CTCGCCGTTC GGGCAGCTGA TGCTCGCGGT CGCGAGCTTC GGCGTGGGGT TCGTCACGCG CCCGCTCGGC GGGCTCGTGA TCGGCGTCTA CGCGGATCGC GCCGGGCGCA AGCGCGCGAT GATCGCAACG CTGCTCATCA TGGCGCTCGG CACCGCGACG ATCGCCGTCG CGCCGACTTA CGCGCAGATC GGCATCGCGG CGCCGCTGCT GCTCGTGGCC GCGCGCTTGC TGCAGGGGTT CGCGTCCGGC GGCGAGGTCG GCGCGTCCAC CACGCTGCTG ATCGAGCAGG CGCCGCAGGC GCGGCGCGGC TTCTATGCGT CGTTCCAGTT CTCGAGCCAG GGGCTCGCCG CGCTCGCCGG CGCGCTCACC GGCGTGCTGC TCACGTCGAC GCTCAGCGCC GCGCAACTCG AGAGCTGGGG GTGGCGCGTG CCGTTCGTCA TCGGCACGCT GTTCGCGCCG CTCGGCTACT GGCTGCGGCG CACGGTCGAC GAGGCGCCGG CGCCGGCGTC CGCGCCGCGC GGCGACGCCG CGCCGATGCC GCTCGCCGAC GTGCTGCGCC ATCACGGCAA GGCCGTGTTC GCCGGCCTCG GCATCACGAT CGGCGGCACG TCGATCCACT ACATCATCGT GTTCTACATG GCGATCTACG GCGTGCAGGT GCTGCATCTG CCGAGCTGGC TGTCGATGTC GGCGGGCTGC ATCGCCGGCG CGATCCTCGC GGTGGTCACG CCGATCGGCG GCCATCTGTC GGACCGCTAC GGGCGCAACC GGATCGTCTG GTGGACGCGC GTCGCGCTGA TGCTCGCGAT CTATCCGGCG TTCGTCGCGC TCAACCGCTG GCCCGGCGCG GCTTCGCTGC TGTCGATCAT CGCGGCGCTC GCGAGCGTGC ATGCGATCAA CATCGGCGCG ACGGGCGCGA TGCTCGGCGA GCTGTTCCCG CGCCCGGTGC GCGCGACGGG CGGCGCGCTC GTCTACAGCG TCGGCGTCGC GATCTTCGGC GGATTCGCGC AATTCTTCGT CACGTGGCTG ATCGCCGCGA CGGGCAATGC GAACGCGCCC GCGTGGTACG CGATCGGCTG CGGCGCGCTG ACGCTCGCCG CGCTCGGCTC GATGGACGAC AAGGCGGGCA AGCCGCTCGA CTGA
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Protein sequence | METSALNFAG APADARAAAK KRRLIAAAAV GNALEFYDFT VYSFFAILIG KLFFPVHSPF GQLMLAVASF GVGFVTRPLG GLVIGVYADR AGRKRAMIAT LLIMALGTAT IAVAPTYAQI GIAAPLLLVA ARLLQGFASG GEVGASTTLL IEQAPQARRG FYASFQFSSQ GLAALAGALT GVLLTSTLSA AQLESWGWRV PFVIGTLFAP LGYWLRRTVD EAPAPASAPR GDAAPMPLAD VLRHHGKAVF AGLGITIGGT SIHYIIVFYM AIYGVQVLHL PSWLSMSAGC IAGAILAVVT PIGGHLSDRY GRNRIVWWTR VALMLAIYPA FVALNRWPGA ASLLSIIAAL ASVHAINIGA TGAMLGELFP RPVRATGGAL VYSVGVAIFG GFAQFFVTWL IAATGNANAP AWYAIGCGAL TLAALGSMDD KAGKPLD
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