Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3023 |
Symbol | |
ID | 4884331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 2967452 |
End bp | 2968129 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640128951 |
Product | LysE family translocator protein |
Protein accession | YP_001060036 |
Protein GI | 126439294 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.917824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATGAGCT TCGCCCCTAC GTCGATGCTG TCCGACGGCT TTTTCCTGTC GCTTTCGCTG TGCCTCGACA TCGGCCTCGT AAACGTCGCG ATGCTCTCGC TCACGCTGTC GCACGGGTTC AGGCCGGGCT TCTGGCTCGG CGTCGGCTCG TGCGTCGGCG ACCTCGTCTA TGCGGCGCTC GCGCTCGCCG GCATGGCCGT GCTGCTCAGG TTCGAAGCCG TGCGCTGGGT CGTGTGGCTC GGCGGCGGCG CGGTGCTGCT GTTTCTCACG TGGAAGATGG CGTGCGAGGC GCTCTTTCCC GAACCGGCGC GCAATATCGA CGACGGCGCG CCCGCCGCCC TCGCGCGGGC GAGCACCTCG CGCAACTTCG CGCGCGGGAT GCTGCTCGCG ATGTCGTCGC CATCGGCGAT CCTGTGGTTC GCGGCGGTCG GCGGCGCGTT GATCGCGAAG GCCGGCGCGA CGACGCCCGC GAGCGCATCG GTGTTCCTGT CGGGCTTCTT CCTCGGCGGG CTCGCGTGGA CGCTCTTTCT CTGCACGCTC GCGAGCCAGG GCCGCAAGCG CGCGGGCGCG GGGCTGATGC GCGCGTGCCA CGTCGTGTCG GCGCTGCTTT TCGCGTACTT CGCGTACAGC GTGATCGTCG GCGGTTATCG CGACCTGATC CTGAACGCGG CGGCCTGA
|
Protein sequence | MMSFAPTSML SDGFFLSLSL CLDIGLVNVA MLSLTLSHGF RPGFWLGVGS CVGDLVYAAL ALAGMAVLLR FEAVRWVVWL GGGAVLLFLT WKMACEALFP EPARNIDDGA PAALARASTS RNFARGMLLA MSSPSAILWF AAVGGALIAK AGATTPASAS VFLSGFFLGG LAWTLFLCTL ASQGRKRAGA GLMRACHVVS ALLFAYFAYS VIVGGYRDLI LNAAA
|
| |