| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1203 |
|---|
| Symbol | |
|---|
| ID | 4883948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1185246 |
|---|
| End bp | 1186418 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640127131 |
|---|
| Product | putative lipopolysaccharide heptosyltransferase III |
|---|
| Protein accession | YP_001058252 |
|---|
| Protein GI | 126441096 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGCTTT CCAGGCCGCC GCGCACCATT CTCGTATCCT GCACGCGTCG CCTTGGCGAC
GTGCTGCTGA CGACGCCGCT CGTCCGGTCA CTGAAGGCGC GCTGGCCCGA CGCGCAGATC
GACATGATCG TGTTTCGCGG CACTGAAGGC GTGCTCGAGC ACAATCCCGA CATCCGCCGC
GTGATCACGG TCGCGCCGCG CGCTCGGCCG AAGGAGCGCA TCGCCGATGC GCTGCGCATC
TGGCGCAAGT ACGATCTCGC GTGTGCGGCG ATCAGTTCCG ATCGCGCGCG CTTCTATGCG
TTCTTCGCGG GGCGCAGGCG GATCGGGCTC GTCGATCCCG GGCGGCTCAC GTGGCTCACG
CGTTTCATCC TGAACGGCAT CGTGCTCGAC GAGCATCGCG ATGTCCATAC CGTCACGAGC
AACCTGTCGC TGGCCGACGC GCTTGATGTA CCGCGATGCG CCGACGTCGT CGCGCCCGGC
ATCGGCGACG ATCCCGCCGC CTGCGCTCGC TTCGACGCGA AGCTGTATGG AACGCCCGCG
CTGTCACGCG GCGAGCCGTA CATCGTGCTG CATCCGTATC CGATGTTCCG CTACAAGCAG
TGGCATGAGG ACGGCTGGGT CGATCTCGTG CGCTGGGCAC GCAGCAGCGG GTTCGCGGTC
GCGCTGAGCG GCGGTCCCGC GCAGGCCGAG CGCGACTATG CCGCGCGTAT CGCGCGAGCG
GCCGGCGAAC CCGTGTTGAA CATGACGGGG GAACTGTCGT TCGGCGAGAG CGCCGAGATG
TTTCGGCACG CGCGGCTCTT CATCGGCCCG GACACCGGCG CGACGCATGT TGCCGCCGCC
TGCGGCGTTC CGACGATCGC GCTCTTCGGG CCGTCGAATC CGACGCGCTG GGGCCCGTGG
CCCGCGCATT GGCCGGCCGG CGACGAGCCG TGGCCCCTGC GCGGTTCGGG ACGGCGCGGC
AATGTCTATT TGCTGCAGGG CGAAGGCGAT TGCGTGCCGT GCAAGCTCGA AGGCTGCGAT
CGGCATCTGG ACAGCTGGAG CCGATGCCTG AGCGAACTGC CGTCGGCGCG TGTGATCGGC
GTGGCTGCGG CGATGCTCGG ATTCGATGCG GCTAACGCGC CGGCTGACGT CGCCACGCCG
GTCGATGTCA GCCGGCTCGC GGCGCGCAAG TAG
|
|---|
| Protein sequence | MTLSRPPRTI LVSCTRRLGD VLLTTPLVRS LKARWPDAQI DMIVFRGTEG VLEHNPDIRR
VITVAPRARP KERIADALRI WRKYDLACAA ISSDRARFYA FFAGRRRIGL VDPGRLTWLT
RFILNGIVLD EHRDVHTVTS NLSLADALDV PRCADVVAPG IGDDPAACAR FDAKLYGTPA
LSRGEPYIVL HPYPMFRYKQ WHEDGWVDLV RWARSSGFAV ALSGGPAQAE RDYAARIARA
AGEPVLNMTG ELSFGESAEM FRHARLFIGP DTGATHVAAA CGVPTIALFG PSNPTRWGPW
PAHWPAGDEP WPLRGSGRRG NVYLLQGEGD CVPCKLEGCD RHLDSWSRCL SELPSARVIG
VAAAMLGFDA ANAPADVATP VDVSRLAARK
|
|---|
| |